Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2407 ATGGCATTTGGGTTCATGGAGGTGCAGCTGGTGAAAGCAAAGGGTCTTCATGAAACCGATGTCTTTGCTCATATGGATCCGTATGTCCTGTTACAATACAAAGGTCAAGAGCGCAAGAGCCGTGTAATTCATGAGGGAGGCAGAAATCCTGAATGGAATGAGAAGTTTGTATTCAGAGTAGAATATCCTGGATCAGGTGACCAATACAAGCTCAACCTTGTAATCATGGACAAGGATGTATTTTCTGCAGATGACTTTGTTGGCCAGGCTGCAGTATATGTAAAGGATTTATTGGCAGAAGGAACAGAGAAGGGATCAGCTGAGCTTCGTCCTCACAAGTATAGTGTGGTTCGAGGAGACCAATCTTACTGTGGTGAAATTGAAGTTGGTATAACTTTCACCTTAAAGGAACAGGAATATGATGATGATGATGATGCTGGAGGATGGAAGCAAAGTGGCTTTTAA 465 0.428 MAFGFMEVQLVKAKGLHETDVFAHMDPYVLLQYKGQERKSRVIHEGGRNPEWNEKFVFRVEYPGSGDQYKLNLVIMDKDVFSADDFVGQAAVYVKDLLAEGTEKGSAELRPHKYSVVRGDQSYCGEIEVGITFTLKEQEYDDDDDAGGWKQSGF* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2407 154 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 153 - -
Pvu8g2407 154 Pfam C2 domain 6 103 IPR000008 -
Pvu8g2407 154 PANTHER C2 DOMAIN-CONTAINING 1 153 - -
Pvu8g2407 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 134 IPR035892 -
Pvu8g2407 154 SMART C2_3c 5 106 IPR000008 -
Pvu8g2407 154 Gene3D C2 domain 3 135 IPR035892 -
Pvu8g2407 154 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2407 Pvu-Chr8 54715926 54719190 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2407 3 109 C2H2 Transcription Factor Family AT4G21160 28.037 3.39e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2407 - - gmx:100500493 276.559