Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2394 ATGGATAGAAAGCAAGAACAGGAGAAGGAGAACTCAAACATGTCTAGCATTGATGTTACTATAATAACTCCGAAAGTCCCAAAAGCAGTTTCACCTGTTTCTTCTGCAGCAGAGGGGGACACCTTAAGGAGGCCACGTGGAAGGCCAGCAGGGTCCAAAAACAAGCCTAAGCCACCCATAATTGTGACCAGAGATAGTGCTAATGCACTGAAGGCTCATGCCATGGAAGTGAGTTCAGGGTGTGATGTGAATGAAAGTTTGTTGAACTTTGCAAGGAGAAAGCAACGTGGCCTTTACATACTCAATGGGACAGGGTGTGTAACAAATGTAACACTGCGCCAGCCAGGCTCATCTGGTGCCATTGTGACCCTTCATGGTAGGTTTGAGATTCTGTCACTGCTGGGATCAATCCTTCCCCCACCAGCCCCTCCAGGGATCACAGGCCTCACAATTTACTTGGCTGGTGCTCAAGGGCAAGTTGTGGGAGGTGCAGTGGTTGGTGCTTTGATTGCTTCGGGCCCTCTTGTAATCATGGCTGCATCATTCATGCATGCTACTTTCGATCGTCTGCCTTTGGAAGATGATGAACTTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGACGCACCCACCATCTTGATATCTCTGACTTGTATGCAATGCCACAGAACCTGCTCATGAATGGTACAATGCCCCCAGAGATATACTCCTGGGCACCAGGGCGGAACTTGTCAAAAACATGA 747 0.4833 MDRKQEQEKENSNMSSIDVTIITPKVPKAVSPVSSAAEGDTLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLYILNGTGCVTNVTLRQPGSSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPLVIMAASFMHATFDRLPLEDDELAAAMQNQHYQNGRTHHLDISDLYAMPQNLLMNGTMPPEIYSWAPGRNLSKT* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2394 248 Gene3D - 69 213 - -
Pvu8g2394 248 ProSiteProfiles PPC domain profile profile. 67 205 IPR005175 -
Pvu8g2394 248 PIRSF ESCAROLA 1 243 IPR014476 GO:0003680
Pvu8g2394 248 SUPERFAMILY AF0104/ALDC/Ptd012-like 67 199 - -
Pvu8g2394 248 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 247 IPR014476 GO:0003680
Pvu8g2394 248 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 4 247 - -
Pvu8g2394 248 MobiDBLite consensus disorder prediction 1 60 - -
Pvu8g2394 248 Pfam Plants and Prokaryotes Conserved (PCC) domain 72 182 IPR005175 -
Pvu8g2394 248 CDD DUF296 73 153 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2394 Pvu-Chr8 54628053 54629266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2394 26 247 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 73.214 1.09e-102 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2394 - - vra:106765118 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2424 1 49546936 49548494 Pvu8g2394 8 54628053 54629266 PCT