Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2385 ATGAAGGCATTGATTCTGGTTGGGGGATTTGGAACAAGGTTGAGGCCACTAACACTCAGTTTCCCTAAGCCTCTTGTTGATTTTGCTAACAAGCCTATGATTCTGCATCAGATAGAGGCCCTTAAGGCCATTGGAGTTACTGAGGTGGTGCTAGCCATCAATTACCAACCAGAGGTTATGTTGAATTTTTTGAAGGATTTTGAAACAAAGCTTGGCATCAAGATCACGTGTTCTCAAGAAACTGAACCACTAGGAACAGCAGGTCCCCTGGCTCTTGCTAGGGATAAGCTGATAGATGACTCTGGGGAGCCCTTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTATCCACTTAAAGAAATGATTGAATTCCATAAAGGCCACGGAGGAGAGGCTTCCATAATGGTAACAAAGGTGGACGAGCCATCAAAATATGGTGTGGTTGTGATGGAAGATAGCACAGGACAGGTTGACAAATTTGTTGAGAAACCGAAATTGTTTGTTGGCAACAAAATCAATGCTGGAATTTACCTGCTGAACCCCTCTGTTTTGAATCGAATTGAACTGAGGCCCACTTCTATCGAGAAAGAGGTGTTTCCAAAGATTGCTGCTGAGAAAAAGCTATTTGCAATGGTACTGCCAGGATTCTGGATGGACATTGGACAGCCGAGGGACTATATTTCTGGCCTGAGGCTTTACCTGGACTCATTGAGGAAGAAGTCATCTTCTAAGTTGGCCAGTGGGTCTCAAATTGTGGGGAATGTCATTGTGGATGAGACAGCCAAAATTGGTGAGGGATGTCTCATTGGACCTGATGTTGCTATTGGTCCTGGCTGCATTATTGAGCAAGGTGTTAGACTCAAAAGCTGCACAATAATGCGAGGAGTGAGGGTTAAGAAGCATGCTTGTGTATCCAGCAGTATTATTGGGTGGCATTCCACTGTTGGTCAATGGTCTCGAGTGGATAATATGACCATCCTGGGAGAAGATGTCCATGTATGTGATGAAATTTACAGCAATGGTGGTGTGGTTTTACCCCACAAGGAGATCAAATCAAATATTCTGAAGCCAGAGATTGTCATGTGA 1086 0.4383 MKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKAIGVTEVVLAINYQPEVMLNFLKDFETKLGIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIEFHKGHGGEASIMVTKVDEPSKYGVVVMEDSTGQVDKFVEKPKLFVGNKINAGIYLLNPSVLNRIELRPTSIEKEVFPKIAAEKKLFAMVLPGFWMDIGQPRDYISGLRLYLDSLRKKSSSKLASGSQIVGNVIVDETAKIGEGCLIGPDVAIGPGCIIEQGVRLKSCTIMRGVRVKKHACVSSSIIGWHSTVGQWSRVDNMTILGEDVHVCDEIYSNGGVVLPHKEIKSNILKPEIVM* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2385 361 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 1 361 - -
Pvu8g2385 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 361 - -
Pvu8g2385 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058|GO:0016779
Pvu8g2385 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Pvu8g2385 361 Pfam Bacterial transferase hexapeptide (six repeats) 261 293 IPR001451 -
Pvu8g2385 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 233 IPR029044 -
Pvu8g2385 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
Pvu8g2385 361 Gene3D Hexapeptide repeat proteins 235 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2385 Pvu-Chr8 54518859 54522165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2385 1 147 Eukaryotic Initiation Factors Gene Family AT4G18300 23.871 1.41e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2385 K00966 - gmx:100808375 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2385 8 54518859 54522165 Pvu8g2385 8 54518859 54522165 ECH
Pvu1g2448 1 49711600 49714735 Pvu8g2385 8 54518859 54522165 PCT