Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2384 ATGGGGCAGAAACAGCAAGCGAGTTCTGACGTCGAGAATGAAGTGAAGAAACGACGACGTGTTGGTTTCTCAGGCATAGATGATGGAGTTGAGGCCAAAGATTGCATCACAATCTACCTAGTTTCAAGCAAGGAAGAATTTGATGCTCCAGAGAGTTTTGTCATTCATCCTGTTGATTTGAATAGCTTTTTCAACGATGATGGAAAAATTTATGGCTACGTGGGTTTGAAGATTACCATCTGGATTAGCAGCATATCTTTTTATGCTTATGCTGATATTGCATTCCAAAGTTCATCTGATCAAGGCAAAGGTATCACTGATCTAAAATCTGCTCTTCAGACAATTTTTGCTGAGACTCTTGTTGATAGCAAGGATGAATTCCTTCAAAAATTTATGGTGGACAACGATTTTGTTAGAGCAAACATCTCAGAGGGAGAAGCTTTGAAGCACAAGGCTTTCAAGGGGAACATTTGTGATTCTAATCAGCATACAGATTCATCTACTTCAAATGTCGAGGTTGTCCGTTTGGTGGCAGGCAAGATGGCTACTGGACAACTTTACAGTCATCTAATACCCCTCACACTACTACTTGTTGATGGTAGCAGTCCTATCGATGTTACTGATTCACAGTGGGAGCTGTATCTTGTATGTCAGAAGAAAACTGATCAGCAGGGAGAGATCCAATGTAGGGTGATTGGTTTTACTGCTCTTTATCGATTTTATCACTATCCTGATGATTCCAGATTGCGACTAAGTCAGATACTGGTACTACCTCCTTACCAGCACAAGGGTTATGGTCGATTCCTTCTAGAGGTGCTTTATGATGTTGCGATATCTGAAAATGTTTTTGATTTCACCGTAGAAGAGCCACTAGATCACTTCCAACATGTCCGCACTTGTGTTGATATCCTTCGCCTTCGTCGTTTTGACCCAATTCAGAATATAGTTACTAGAGCTGTTTCACTTCTAAAGCAAGGAAAGTTATCAAAGAAAACAAATTGTCCTCGACTTTTGCCTCCACCCAGTGCTGTGGAGGATGTAAGGAAAAATCTGAAAATTAACAAGCAGCAGTTTCTCCAGTGTTGGGAGGTTTTGATCTACATTGCCATTAATCCTGCTGACAAGAACGCGGAGAACTTTATTAGTATTATTTCCAACCGTATCAAGTATGATATCTTAGGGAAAGATTCTGGGACCTCTGGGAAGCAACTTTTTGATGTACCAAGTGATGTTGATCAGGACATGTCATTTGTCATGTTCAGGTCAGAGGCCAATGAAGCTAGTAATACTGTGCAAATGGATGACAATCAGGCTAATCAGGAGGAGCAACTCCAGAAGTTAGTTCAGGAAAGGTTGAAACAAATTCAGTTGGTTGCTGCAAAGGTGACCCATCATCTTGGGAACACAGGTGTGGCTGTTGATTAA 1425 0.4098 MGQKQQASSDVENEVKKRRRVGFSGIDDGVEAKDCITIYLVSSKEEFDAPESFVIHPVDLNSFFNDDGKIYGYVGLKITIWISSISFYAYADIAFQSSSDQGKGITDLKSALQTIFAETLVDSKDEFLQKFMVDNDFVRANISEGEALKHKAFKGNICDSNQHTDSSTSNVEVVRLVAGKMATGQLYSHLIPLTLLLVDGSSPIDVTDSQWELYLVCQKKTDQQGEIQCRVIGFTALYRFYHYPDDSRLRLSQILVLPPYQHKGYGRFLLEVLYDVAISENVFDFTVEEPLDHFQHVRTCVDILRLRRFDPIQNIVTRAVSLLKQGKLSKKTNCPRLLPPPSAVEDVRKNLKINKQQFLQCWEVLIYIAINPADKNAENFISIISNRIKYDILGKDSGTSGKQLFDVPSDVDQDMSFVMFRSEANEASNTVQMDDNQANQEEQLQKLVQERLKQIQLVAAKVTHHLGNTGVAVD* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2384 474 Pfam Histone acetyl transferase HAT1 N-terminus 30 199 IPR019467 GO:0006325
Pvu8g2384 474 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 28 367 IPR016181 -
Pvu8g2384 474 CDD NAT_SF 226 282 - -
Pvu8g2384 474 Gene3D - 33 199 IPR037113 GO:0006325
Pvu8g2384 474 Gene3D - 138 298 - -
Pvu8g2384 474 PANTHER HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT 1 463 - -
Pvu8g2384 474 Pfam Acetyltransferase (GNAT) family 229 291 IPR000182 GO:0016407
Pvu8g2384 474 PANTHER HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT 1 463 IPR017380 GO:0004402|GO:0005634|GO:0016573|GO:0031509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pvu8g2384 Hat1_N 2.6e-21 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2384 K11303 - gmx:100820418 843.188