LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu8g2374	ATGCAGTCTTTAGGATTGTCGCATCTTCTTCAAATTCTTCTTCAAATTCTTACATGCATTATGCTACTGACTCCTTCATTCGCTAAAGATGACCGAGAGATTTACATAGTATACATGGGAGTATATCCAAAGGACACGGAAATCACAGACTCATTTCACACCAGTATGGTTCAAAGTGTCATCGGCAGCAAATTTGTATCTGATACTTTGCTGCACCGCTACAAGACTTTCAATGGATTTGTGGCGAGGCTAACCAAAGAAGAATCAGAAATAATGAAAGGAATGGATGGTGTGGTCTCTGTTATTCCAAATAGAGTCTACAATGTCCAAACATCAAGGTCCTGGGACTTCCTTAACTTCCCTGAAAATGTCCCAAGAACAAATGTAGAAGGTAACACAATTGTTGGGGTAATCGATAGTGGAATTTGGATTTCTAATTCCAATAGCTTTACTGATGGAGGCTTTGGTCCACCACCACCGAAATGGAAGGGAACATGCAATAACTTCACTTGCAATAACAAAGTAATTGGAGCAAGATATTTTCGCATGGGGGGTGTGTTCACGCCAGAGGACATCATATCTCCAACTGATACTAGTGGTCACGGGTCTCACTGTGCATCGACTGCTGCTGGAAACCGTGTTCCCAATGCAAATCTGTTAGGGCTTGGGTCAGGAATAGCAAGAGGAGGAGTTCCTTCAGCACGCATTGCTGTGTATAAAGTTTGTTGGACAAAGGGTTGTGAGACTATTGACATTCTTGCAGGATTTGATGCAGCCATTGCGGATGGTGTTGATATTATTTCTATTTCAGTGGGACCAACAAAGGTCCAACACCTGGAATATTTTCAAGATGACATTGCAATAGGAGCTTACCATGCAATGAAGAGTGGCATATTAACTTCTAAAACTGCAGACAATTTGGGTCCAAATCGTTATACAATGGTGAATCTTGCACCCTGGTTCCTTTCTGTGGCTGCCAGCACTATAGACAGAAAGTTTTTCACTGATCTCAAACTGGGCAATGGCCAGGTCATCCAGGGAATTTCAGTGAATACATTTAGTCCACCACAGAATGGTTACCCTCTAGTTTATGGTGGAGATGTACCAGCTCCTGGATTTAATAGTTCCGAATCCAGGCTTTGTCGTGACAATTCTTTGAATGGAGCTTTGGTGAGTGGGAGAATTGTTTTGTGTGAAGGCTATACTTCTTCTTTCCGTCTGGGATTTGCTTCTGGGGCTGCTGGTGTTATATTCACAAGTACATCACCTTTAGTTGTCGCAGATGTATTTGCATTGCCAACACTTCACATTAACCTAAATGATGGGCAATCCGTATATAATTATTTAAAGTCAACAAGTAATCCAACAGCCATCATATCCAAGAGTTACGAAAGAAAAGACTCAAGAGCCCCTTACATTGCTCCTTTCTCATCAAGAGGTCCAAATAGGATCACTCCAAACATTCTTAAGCCTGATATAGCAGCTCCAGGAGTTGATATTCTGGCTGCATGGTCTCCAATTTCTCCTATTTCTTCAGTTAAAGGAGATAATAGAACATCGTATTTCAATATAATATCTGGAACTTCAATGGCATGCCCTCATGTTACTGCAACAGCTGTTTACGTCAAATCATTTCATCCCAGCTGGTCTCCTGCTGTACTTAAATCCGCATTGATGACAACTG	1684	0.4151	MQSLGLSHLLQILLQILTCIMLLTPSFAKDDREIYIVYMGVYPKDTEITDSFHTSMVQSVIGSKFVSDTLLHRYKTFNGFVARLTKEESEIMKGMDGVVSVIPNRVYNVQTSRSWDFLNFPENVPRTNVEGNTIVGVIDSGIWISNSNSFTDGGFGPPPPKWKGTCNNFTCNNKVIGARYFRMGGVFTPEDIISPTDTSGHGSHCASTAAGNRVPNANLLGLGSGIARGGVPSARIAVYKVCWTKGCETIDILAGFDAAIADGVDIISISVGPTKVQHLEYFQDDIAIGAYHAMKSGILTSKTADNLGPNRYTMVNLAPWFLSVAASTIDRKFFTDLKLGNGQVIQGISVNTFSPPQNGYPLVYGGDVPAPGFNSSESRLCRDNSLNGALVSGRIVLCEGYTSSFRLGFASGAAGVIFTSTSPLVVADVFALPTLHINLNDGQSVYNYLKSTSNPTAIISKSYERKDSRAPYIAPFSSRGPNRITPNILKPDIAAPGVDILAAWSPISPISSVKGDNRTSYFNIISGTSMACPHVTATAVYVKSFHPSWSPAVLKSALMTT	561

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu8g2374	561	ProSitePatterns	Serine proteases, subtilase family, serine active site.	527	537	IPR023828	-
	Pvu8g2374	561	Gene3D	-	330	466	-	-
	Pvu8g2374	561	PANTHER	PUTATIVE-RELATED	23	561	-	-
	Pvu8g2374	561	Pfam	Peptidase inhibitor I9	35	108	IPR010259	-
	Pvu8g2374	561	Gene3D	Peptidase S8/S53 domain	133	561	IPR036852	GO:0004252\|GO:0006508
	Pvu8g2374	561	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	24	109	IPR037045	-
	Pvu8g2374	561	CDD	PA_subtilisin_like	336	459	-	-
	Pvu8g2374	561	CDD	Peptidases_S8_3	107	561	IPR034197	-
	Pvu8g2374	561	ProSiteProfiles	Serine proteases, subtilase domain profile.	114	561	-	-
	Pvu8g2374	561	Pfam	Subtilase family	132	561	IPR000209	GO:0006508\|GO:0008236
	Pvu8g2374	561	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	201	211	IPR022398	-
	Pvu8g2374	561	PRINTS	Subtilisin serine protease family (S8) signature	130	149	IPR015500	-
	Pvu8g2374	561	PRINTS	Subtilisin serine protease family (S8) signature	197	210	IPR015500	-
	Pvu8g2374	561	PRINTS	Subtilisin serine protease family (S8) signature	526	542	IPR015500	-
	Pvu8g2374	561	SUPERFAMILY	Subtilisin-like	110	561	IPR036852	GO:0004252\|GO:0006508
	Pvu8g2374	561	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	23	561	IPR045051	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu8g2374	Pvu-Chr8	54421623	54425630	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu8g2374	31	561	Subtilisin-like Serine Gene Family	AT5G59100	47.601	2.24e-160	473

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu8g2374	-		-	var:108336584	814.298