Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2339 ATGCCTTTTTCTGATTCTGCACCTACCTTACTCTCCAAATGCACCGTCTTTCCAGACCAAAACTCTACTATCGGAAACCTTAAACTCTCTGTTTCGGACCTCCCCATGTTGTCCTGCCACTATATCCAAAAGGGATGTCTCTTTACCCAACCCAATATTCCACTCTACTCTTTAATTCCTCTTCTTAAATCTGCACTCTCTCGCACACTTTCTCTCTTTCCACCCCTCGCTGGCCGTTTAACTACCGATTCCCAAGGTTACGTTTACATCGCTTGCAACGACGCCGGCGTCGATTTCATACACACCAATGCCACCACCATTCGCATCTGCGACCTACTGTCCCCACTCGACGTCCCCGAATATTTCAAAGACTTCTTCGCCTTCGACAGGAAAGTCAGCTACACCGGCCATTACTCACCAATTCTCGCTGTTCAGGTCACCGAACTCGCTGACGGCCTCTTCATCGGCTGCGCCGTCAATCATGCCGTCACCGATGGCACCTCCTTCTGGAACTTCTTCAATACCTTCGCTCAGCTCTGCAGAAACGCGAACAAAAGCATCCGCAATGTACCGTACTTCCACCGCGACTCCATTCTGATCTCTGACGCCGTCCTCCGGCTACCGGAAGGCGGTCCTCAGGTCACGTTCGATTCTCACGCGCCGCTGCGCGAGAGAATCTTCAGTTTCAGCCGCGAAACAATTCAGAAACTGAAGGCCAAGACGAACAACCGTCGGTGTCAGGAGAACAACAGCACGAGCGTCGAGTTGATGCGGAAGCAAAGCAACGATCATCACGCGAAGGAGAACAACGGCAAGGCCGGTACAATTCTGGAGAGTTGGTTCAAGGTGAACTCGAATTCGAAACCGCAAACGATTACCGAAACGATGGAGATTTCGTCGTTTCAATCAGTGTGCGCGTTGCTGTGGCGCGCGATTACGCGCGCGAGGAAATTGCCTGCTTCCAAAACTACCACGTTCAGAATGGCGGTTAACTGCCGTCACCGAATAGAACCAAAATTGGAACAGTACTACTTCGGGAACGCGATTCAGAGCGTGCCAACGTACGCCTGTGCCGGTGACGTGTTATCCAGGGATCTACGGTGGTGCGCGGAGCAGCTGAACTCAAACGTGAAGGCGCACGACGAGGCCATGGTGCGGCGCTTCGTAGACGATTGGGAGCAGAAACCCAGGTGCTTCCCTCTTGGGAACCCTGACGGCGCATCCATCACTATGGGTAGTTCTCCGAGGTTTCCAATGTACGATAACAATTTCGGGTGGGGGAGACCTCTGGCGGTGAGAAGTGGAAGAGCGAACAAATTCGACGGTAAGATCTCGGCGTTTCCCGGAAGAGATGGAACAGGGACCGTTGATTTGGAGGTTGTTTTAGCGCCCGAAACCATGGAAGCGCTGGAATCTGATCCAGAATTCACGAGATATGCAACGTGTCAGTTGTGA 1455 0.5237 MPFSDSAPTLLSKCTVFPDQNSTIGNLKLSVSDLPMLSCHYIQKGCLFTQPNIPLYSLIPLLKSALSRTLSLFPPLAGRLTTDSQGYVYIACNDAGVDFIHTNATTIRICDLLSPLDVPEYFKDFFAFDRKVSYTGHYSPILAVQVTELADGLFIGCAVNHAVTDGTSFWNFFNTFAQLCRNANKSIRNVPYFHRDSILISDAVLRLPEGGPQVTFDSHAPLRERIFSFSRETIQKLKAKTNNRRCQENNSTSVELMRKQSNDHHAKENNGKAGTILESWFKVNSNSKPQTITETMEISSFQSVCALLWRAITRARKLPASKTTTFRMAVNCRHRIEPKLEQYYFGNAIQSVPTYACAGDVLSRDLRWCAEQLNSNVKAHDEAMVRRFVDDWEQKPRCFPLGNPDGASITMGSSPRFPMYDNNFGWGRPLAVRSGRANKFDGKISAFPGRDGTGTVDLEVVLAPETMEALESDPEFTRYATCQL* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2339 484 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 8 479 - -
Pvu8g2339 484 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 479 - -
Pvu8g2339 484 Pfam Transferase family 10 476 - -
Pvu8g2339 484 Gene3D - 9 205 IPR023213 -
Pvu8g2339 484 Gene3D - 221 474 IPR023213 -
Pvu8g2339 484 SUPERFAMILY CoA-dependent acyltransferases 37 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2339 Pvu-Chr8 53934137 53935591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2339 61 471 Monolignol Biosynthesis Gene Families AT5G48930 26.066 2.27e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2339 - - vun:114195488 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2490 1 50073685 50076009 Pvu8g2339 8 53934137 53935591 ECH
Pvu8g2339 8 53934137 53935591 Pvu8g2339 8 53934137 53935591 ECH
Pvu1g2489 1 50064134 50066017 Pvu8g2339 8 53934137 53935591 PCT
Pvu8g2339 8 53934137 53935591 Pvu1g2490 1 50073685 50076009 PCT