Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2327 ATGGCTCTAACTGTAATAATGATTCTTCTGAGTGTTGTTTCACAAACCTTGGTGAACATGGCACCAGCTACGGTTGCTCTTGTTTTGAGTTCAGAGAATGATAAGGTGGCTTTACTTGCTTTGAAGAAGAAGCTTACCAATGGAGTGCCTAATTCTCTTCCATCATGGAATCACTCTTTGCATTTCTGTGAGTGGCAGGGTGTTACATGCGGACATCGCCACATGAGAGTCTCTGTCTTGCACTTGGAAAATCAGAACTGGAATGGTACTCTTGGACCATCCTTGGGAAATCTAACCTTCCTCAGAGGCCTCATTCTTTCCAAGATCAACTTGCATGGTGAAATTCCAACACAAATTGGTCGACTAAAGAGGTTGCAGGTTCTTGACTTGAGCCACAACAATCTAAATGGTCAGATTCCTATACACCTTACCAACTGCTCTAAACTTGAGGTGATTAACTTGTTGTACAACAAACTCTCTGGAAAAGTTCCCTCCTGGTTTGGACTTGGATCCATGACACGGCTTAATATGTTGCTTCTTGGTGCCAATGATCTAGTTGGTACTATTCCACCTTCCTTGGGGAATCTTTCATCCCTCCAAAATATCACGCTTGCAAGAAATCATTTGGTGGGAAGTATACCACATGTGTTGGGTCGGTTATCAAATTTGAAAGAGCTGTATCTTGGTTTAAATTATTTGTCAGGAGTAGTGCCTGATTCTCTTTATAATCTTTCCAATATTCAAGTCCTTGTTCTCGGGGAAAACCAGTTATCTGGTACTTTTCCATCAAAAATGCAACTTGCTTTTCCAAACCTTCGAGCATTCTTCGTTGCAGTGAACCAGTTCAGTGGAACTTTCCCGTCTTCAATATCCAACATCACCGGATTGCAAGCGTTTGATATTTCCTCAAATAGTTTTAGTGGGCCAATTCCTTCCACTTTTGGAAGCCTAAATAAACTTCAGTTGGTGGACATTAGTCGCAATAGTTTTGGAAGTGGCAGAGCTCGTGATTTGGATTTCCTTTCCTCTTTAACCAATTGTACTCAATTGAAGATACTTCTTTTGGATTGGAATGAATTTGGTGGTGTGTTGCCAGATCTCATCGGCAATTTTTCTACCCACCTCACTTCGCTTAGTATGGGGTTGAATCAAATATCTGGAATGATACCTGAAGGAATTGGACAGCTAATCGGTTTAACTGACTTCATCATGGAAGATAATTATCTAGAGGGAACTATTCCAGATTCAATTGGAAGGCTTAAAAATCTAGTAAGATTGGTTCTGCAAGAAAACAAATTTTCTGGTAATATTCCTACTGCCATTGGTAATCTTACTATGTTGTCTGAACTTTATCTGCACACAAATAGATTTGTTGGAGGCATTCCCTTAAGCCTCAAATACTGCACTCGAATGCAGTCATTTGGTGTTTCCACCAACAACTTGAGTGGGAATATCCCTACTCAAACATTTGGCAATCTAGAAGACTTGATAAATCTTGACTTATCCAACAACTCTTTCACTGGTTCCATTCCTTTAGAGTTTGGAAACTTGAAGCACCTTTCCCTATTACATCTATACGAAAACAAGTTGTCTGGTGAAATTCCCCAAGAACTTGGAGCTTGTTCCGCATTAACACAACTCGTGCTGAGATCAAACTTCTTTCGGGGAACCATACCTTCGTTTTTGGGCTCTTTAGGATCCCTGGAAATGCTAGACCTTTCTAACAACAGCTTCTCTGGCACAATCCCTGGTGAACTACAAAAGTTGAGTTATTTGAATACTCTGAACTTGTCTTTTAACCATCTTTATGGTGAGGTTCCTACAGGAGGTGTCTTTAATAATGTTACAGCAATTTCACTCATTGGAAATAAGGATCTCTGTGGGGGAATACCTCAACTGAAGCTTCCTGCATGCTCTAAGTTGCCCTCCGAGAAACACAAGTGGTCTTTTAGAAAGAAACTCATCCTCATCATTGCAATTGCCGTTGTTGTTGGTTTGGTTACTTTGACACTGTTTATCAGCTTCTATTTGTTCAGGAAAAGGACCAAAACTTCATTGACTTTATGGTCTCCGAAAAATAGGTACGTGAAGGTTTCTTATGGAGAGCTGCATAAAGCAACCAACGGATTTTCTTCATCCAATTTGGTAGGGTCCGGAAGCTTTGGTTCTGTATATTGTGGATCTCTTCTCCCTTACAAAAGACCCATTGCTGTCAAGGTATTGAATCTTGAAACAGGTGGGGCATCAAAGAGTTTCGTAGCTGAGTGCAAGGTTCTAGGAAGGATCATGCATCGGAACCTTCTCAACATCTTGACATGTTGTTCAAGTATTGATTATAATGGTAAAGATTTCAAGGCTATAGTTTTTGACTTCATGCCCAATGGCAGTCTAGAAAGTTTGCTGCACAACAACGAAGATCTCGAGTCTAGAAATTTCAGTCTCAACCTTGAACTTATGCTAAACATTGCTCTTGATGTTGCTAATGCATTGGATTATCTTCATCATGGATCTGAGCAAGCTGTAGTTCACTGTGATATTAAGCCAAGCAACGTTCTTCTTGATGATGACATTGTTGCTCACTTGGGAGATTTTGGGTTAGCAAGGCTCCTTCATGTGACCACGGGACATTCCAACAGAGATCAGGTTAGTTCCTCTGCAATTAGAGGAACCATTGGATATGTTCCACCAGAGTACGGAACAGGGTGCAAAGTATCAGCAAAAGGAGATATCTACAGCTACGGAATTGTTGTGCTGGAGATGCTGACCAGAAGGAAACCTACTGATGCCATGTTTGGTGAAGCTCTAAGCCTACACAAATTCTGCCAAATGGCAATTCCAGAAGGAATCAGTGAGATAGTAGATCCACGTTTGCTTGTGCCAACTAATGAAGAAGGAAGAAGGGTGATGGAAAGCAAAATTAGGGAGTGTTTGGTGGGCTTTGCTAGGATTGGAGTTTTATGTTCTGCAGAATTACCTGATGAGCGAATGGACATAAAAGATGTGGTACTGGAGTTGCACACAATCAAACAGACACTGTGTCACTAA 3045 0.4089 MALTVIMILLSVVSQTLVNMAPATVALVLSSENDKVALLALKKKLTNGVPNSLPSWNHSLHFCEWQGVTCGHRHMRVSVLHLENQNWNGTLGPSLGNLTFLRGLILSKINLHGEIPTQIGRLKRLQVLDLSHNNLNGQIPIHLTNCSKLEVINLLYNKLSGKVPSWFGLGSMTRLNMLLLGANDLVGTIPPSLGNLSSLQNITLARNHLVGSIPHVLGRLSNLKELYLGLNYLSGVVPDSLYNLSNIQVLVLGENQLSGTFPSKMQLAFPNLRAFFVAVNQFSGTFPSSISNITGLQAFDISSNSFSGPIPSTFGSLNKLQLVDISRNSFGSGRARDLDFLSSLTNCTQLKILLLDWNEFGGVLPDLIGNFSTHLTSLSMGLNQISGMIPEGIGQLIGLTDFIMEDNYLEGTIPDSIGRLKNLVRLVLQENKFSGNIPTAIGNLTMLSELYLHTNRFVGGIPLSLKYCTRMQSFGVSTNNLSGNIPTQTFGNLEDLINLDLSNNSFTGSIPLEFGNLKHLSLLHLYENKLSGEIPQELGACSALTQLVLRSNFFRGTIPSFLGSLGSLEMLDLSNNSFSGTIPGELQKLSYLNTLNLSFNHLYGEVPTGGVFNNVTAISLIGNKDLCGGIPQLKLPACSKLPSEKHKWSFRKKLILIIAIAVVVGLVTLTLFISFYLFRKRTKTSLTLWSPKNRYVKVSYGELHKATNGFSSSNLVGSGSFGSVYCGSLLPYKRPIAVKVLNLETGGASKSFVAECKVLGRIMHRNLLNILTCCSSIDYNGKDFKAIVFDFMPNGSLESLLHNNEDLESRNFSLNLELMLNIALDVANALDYLHHGSEQAVVHCDIKPSNVLLDDDIVAHLGDFGLARLLHVTTGHSNRDQVSSSAIRGTIGYVPPEYGTGCKVSAKGDIYSYGIVVLEMLTRRKPTDAMFGEALSLHKFCQMAIPEGISEIVDPRLLVPTNEEGRRVMESKIRECLVGFARIGVLCSAELPDERMDIKDVVLELHTIKQTLCH* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2327 1014 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Pvu8g2327 1014 SUPERFAMILY Protein kinase-like (PK-like) 685 1005 IPR011009 -
Pvu8g2327 1014 SMART serkin_6 710 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2327 1014 SMART LRR_typ_2 122 146 IPR003591 -
Pvu8g2327 1014 SMART LRR_typ_2 420 444 IPR003591 -
Pvu8g2327 1014 SMART LRR_typ_2 565 588 IPR003591 -
Pvu8g2327 1014 SMART LRR_typ_2 172 196 IPR003591 -
Pvu8g2327 1014 SMART LRR_typ_2 517 541 IPR003591 -
Pvu8g2327 1014 SMART LRR_typ_2 220 243 IPR003591 -
Pvu8g2327 1014 SMART LRR_typ_2 589 614 IPR003591 -
Pvu8g2327 1014 Gene3D Ribonuclease Inhibitor 33 144 IPR032675 -
Pvu8g2327 1014 Pfam Leucine rich repeat 543 602 IPR001611 GO:0005515
Pvu8g2327 1014 Pfam Leucine rich repeat 198 257 IPR001611 GO:0005515
Pvu8g2327 1014 Coils Coil 797 817 - -
Pvu8g2327 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Pvu8g2327 1014 SUPERFAMILY RNI-like 268 608 - -
Pvu8g2327 1014 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Pvu8g2327 1014 Gene3D Transferase(Phosphotransferase) domain 1 792 1013 - -
Pvu8g2327 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 22 1013 - -
Pvu8g2327 1014 Pfam Protein kinase domain 712 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2327 1014 PANTHER LRR RECEPTOR-LIKE KINASE 22 1013 - -
Pvu8g2327 1014 PRINTS Leucine-rich repeat signature 125 138 - -
Pvu8g2327 1014 PRINTS Leucine-rich repeat signature 565 578 - -
Pvu8g2327 1014 Gene3D Phosphorylase Kinase; domain 1 674 791 - -
Pvu8g2327 1014 Gene3D Ribonuclease Inhibitor 337 647 IPR032675 -
Pvu8g2327 1014 Gene3D Ribonuclease Inhibitor 145 336 IPR032675 -
Pvu8g2327 1014 SUPERFAMILY L domain-like 31 330 - -
Pvu8g2327 1014 ProSiteProfiles Protein kinase domain profile. 710 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2327 Pvu-Chr8 53829679 53833020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2327 29 1010 Receptor kinase-like Gene Family AT3G47570 44.646 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pvu8g2327 Pkinase 2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2327 - - gmx:100777490 1569.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2327 8 53829679 53833020 Pvu8g2327 8 53829679 53833020 ECH