Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2326 ATGGCTATAATTCTATTCGTGTTTCTTCTCGGTGTTGTTTCTCAAAACTTAGTGTACATGATGCCAGGTACAATTGCTCTCGCTCTCAGTTCAGAGAGTGACAAGCTGGCTTTACTTGCTTTGAAGCATAAGCTTACCAATGGAGTGCCTAATGCTCTTTCATCATGGAACAGCTCTTTGCATTTCTGTCAGTGGCAGGGTGTCACATGCAGTCACCGCCACATGAGAGTCTCTGTCTTGCACTTGGAAAATCAGAACTGGGGTGGCACTCTTGGACCACCTTTGGCCAATTTAACCTTCCTCAGAGGCCTCATTCTTTCCAATATCAACTTGCATGGTGAAATTCCCACACAAATTGGTCGACTAAAGAGGTTGCAGGTTCTTGACTTGAGCCACAACAATCTAAATGGTCAGATTCCTATACACCTTACCAACTGCTCTAAACTTGAGGTGATTAACTTGTTGTACAACAAACTCTCGGGAAAAGTTCCCTCCTGGTTTGGACTTGGATCCATGACACGGCTTAATAAGTTGCTTCTCGGTGCCAATGATCTAGTTGGTACTATTCCACCTTCCTTGGGGAATCTTTCATCCCTCCAAAATATCACACTTGCAAGAAATCATTTGGTGGGAAGTATACCACATGTTTTGGGTCGGTTGTCAAATTTGAAAGAGCTGTATCTTGGTTTAAATTATTTGTCAGGAGTAGTGCCTGATTCTCTTTATAATCTTTCCAATATTCAAGTTCTTGTTCTCGGGGTAAACCAGTTATCTGGTAATTTTCCATCAAAAATGCAACTTGCTTTTCCAAACCTTCGAGCATTCTTCGTTGGAGGGAACCAGTTCAATGGAACTTTCCCGTCTTCAATATCCAACATCACCGGATTGCAAGCGTTTGACATCTCCTCAAATGGTTTTAGTGGGCCAATTCCTTCCACTTTGGGAAGATTAAACAAACTTAAGAAGTTTAGCATTTCAGATAATAGTTTTGGAAGTGGAAGAGCTCAAGATCTAGATTTCCTTTCCTCTTTAACCAATTGTACTCAATTGAGAATACTTCTTTTGGATTGGAATGAATTTGGTGGTGTGTTGCCAGATCTCATCGGCAATTTTTCTACCCACCTCACTTGGCTTAGTATGGGGTTGAATCAAATATCTGGAATGATACCTGAAGGAATTGGGCAGCTAATCGGTTTAACTGACTTCATCATGGAAGATAATTATCTAGAGGGAATTATTCCAGATTCAATTGGAAGGCTTAAAAATCTAGTAAGATTGGTCCTGCAAGAAAACAAATTGTCTGGTAATAGTCCTACTGCCATTGGCAATCTTACTATGTTGTCTGAACTTTATCTGCACACAAATAGATTTGTTGGAGGGATTCCCTTAAGCCTCAAATACTGCATTCGAATGCAGTCGTTTGGTGTTTCCACCAACAACTTGAGTGGGAATATCCCTAATCAAACATTTGGCAACCTAGAAGACTTGATAAATCTTGACTTATCCAACAACTCTTTCACTGGTTCCATTCCTTTAGAGTTTGGAAACTTGAAGCACCTTTCCATATTACATCTATACGAAAACAAGTTGTCTGGTGAAATTCCCCAAGAACTTGGAGCTTGTTCCGCATTAACAGAACTCGAGCTGGAGTCAAACTTCTTTCGGGGAACCATACCTTCGTTCTTGGGCTCTTTAGGATCCCTGGAAATCCTAGACCTTTCTAACAACAGCTTCTCAGGCACAATCCCTGGTGAACTACAAAATTTGAGTTATTTGAATACTCTGAAGTTGTCTTTTAACCATCTTTATGGTGAGGTTCCTACAGGAGGTGTCTTTAATAATGTTACAGCAATTTCACTCATTGGAAATAAGGATCTCTGTGGGGGGATACCTCAACTGAATCTCCCTGCATGCTCTAGGGTTCCCTCAAAGAAACACAGGAAAAAGCCCAAATCATTTTGTTCGTCACGGTCTCTGCAAAATTTGTATTTGAAGGTTTCTTATGGAGAGCTTCATGAAGCAACCAATGGATTTTCTTCATCCAATTTAGTAGGCGCTGGAAGCTTTGGTTGTGTGTACCGAGGATCTCTTCTCCATTTTGAAAAACCTGTTGCTGTAAAGGTGTTGAATCTTGAAGCTTTGGGGGCGTCAAAGAGTTTCACATCTGAATGCAAGGCTCTAGAAAAGATGAAGCACCAGAATGTACTTAAGATCCTGACTTATTTTTCAGGTATTGATTATAATGGAGATGATTTCAAGGCTATAGTTTTTGAGTTGATGCTTAACGGGAGTCTAGAAAGTTTGCTGCACAGCGACGAAGAGCTCAAGTCAAGAAATCTCAATCCCAACCTTCAACTTTGGCTAAATATTGCTCTTGATGTTGCTAATGCATTGGATTATCTTCACCATGGTTCCGAGAAAACAGTAGTTCACTGTGATATTAAACCAAGCAACGTTCTTCTTGATGATGAGGTTGTTGCCCACTTAGGAGATTTTGGGTTAGCAAGGCTCCTTACTGTGGTCACGGGACATGCAAGTAGAGATCAGATGAGTTCGTTAGCAATCAAAGGAACCATTGGATATGTTCCCCCAGAGTACGGGGCAGGTGGTCGAGTATCAGCACAAGGAGATATTTACAGCTATGGAATTCTCGTGTTGGAGATGCTGACGGGAAAGAAACCAACGAATGACATGTTTGGTGAGAGTCTAAGCCTACACAAATTCTGTGAGATGGCAATTCCTGAAGGAATCCTTGAGATAGTAGATTCACGTTTGCTTGTGCCATATGGGGTCATGGAAACCAACATCACAGAGTGTTTGGCTTCCTTTGCTAGGATTGGAGTTGCATGTTCTGCAGAATTGCCCATTCAGAGGTTGGGCATAAAAGATGTGATAATGGAGTTGAATGCAATCAAACAAAAGTTGTCTTACTAG 2934 0.411 MAIILFVFLLGVVSQNLVYMMPGTIALALSSESDKLALLALKHKLTNGVPNALSSWNSSLHFCQWQGVTCSHRHMRVSVLHLENQNWGGTLGPPLANLTFLRGLILSNINLHGEIPTQIGRLKRLQVLDLSHNNLNGQIPIHLTNCSKLEVINLLYNKLSGKVPSWFGLGSMTRLNKLLLGANDLVGTIPPSLGNLSSLQNITLARNHLVGSIPHVLGRLSNLKELYLGLNYLSGVVPDSLYNLSNIQVLVLGVNQLSGNFPSKMQLAFPNLRAFFVGGNQFNGTFPSSISNITGLQAFDISSNGFSGPIPSTLGRLNKLKKFSISDNSFGSGRAQDLDFLSSLTNCTQLRILLLDWNEFGGVLPDLIGNFSTHLTWLSMGLNQISGMIPEGIGQLIGLTDFIMEDNYLEGIIPDSIGRLKNLVRLVLQENKLSGNSPTAIGNLTMLSELYLHTNRFVGGIPLSLKYCIRMQSFGVSTNNLSGNIPNQTFGNLEDLINLDLSNNSFTGSIPLEFGNLKHLSILHLYENKLSGEIPQELGACSALTELELESNFFRGTIPSFLGSLGSLEILDLSNNSFSGTIPGELQNLSYLNTLKLSFNHLYGEVPTGGVFNNVTAISLIGNKDLCGGIPQLNLPACSRVPSKKHRKKPKSFCSSRSLQNLYLKVSYGELHEATNGFSSSNLVGAGSFGCVYRGSLLHFEKPVAVKVLNLEALGASKSFTSECKALEKMKHQNVLKILTYFSGIDYNGDDFKAIVFELMLNGSLESLLHSDEELKSRNLNPNLQLWLNIALDVANALDYLHHGSEKTVVHCDIKPSNVLLDDEVVAHLGDFGLARLLTVVTGHASRDQMSSLAIKGTIGYVPPEYGAGGRVSAQGDIYSYGILVLEMLTGKKPTNDMFGESLSLHKFCEMAIPEGILEIVDSRLLVPYGVMETNITECLASFARIGVACSAELPIQRLGIKDVIMELNAIKQKLSY* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2326 977 ProSiteProfiles Protein kinase domain profile. 678 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2326 977 Pfam Leucine rich repeat 543 602 IPR001611 GO:0005515
Pvu8g2326 977 Pfam Leucine rich repeat 198 257 IPR001611 GO:0005515
Pvu8g2326 977 Pfam Leucine rich repeat 399 457 IPR001611 GO:0005515
Pvu8g2326 977 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 18 647 - -
Pvu8g2326 977 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 647 976 - -
Pvu8g2326 977 SUPERFAMILY L domain-like 400 630 - -
Pvu8g2326 977 Gene3D Ribonuclease Inhibitor 166 335 IPR032675 -
Pvu8g2326 977 Gene3D Ribonuclease Inhibitor 336 649 IPR032675 -
Pvu8g2326 977 Gene3D Transferase(Phosphotransferase) domain 1 760 976 - -
Pvu8g2326 977 Pfam Protein kinase domain 680 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2326 977 PANTHER LRR RECEPTOR-LIKE KINASE 18 647 - -
Pvu8g2326 977 PANTHER LRR RECEPTOR-LIKE KINASE 647 976 - -
Pvu8g2326 977 ProSitePatterns Protein kinases ATP-binding region signature. 684 707 IPR017441 GO:0005524
Pvu8g2326 977 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Pvu8g2326 977 Gene3D Phosphorylase Kinase; domain 1 658 758 - -
Pvu8g2326 977 Gene3D Ribonuclease Inhibitor 31 165 IPR032675 -
Pvu8g2326 977 SMART LRR_typ_2 565 588 IPR003591 -
Pvu8g2326 977 SMART LRR_typ_2 517 541 IPR003591 -
Pvu8g2326 977 SMART LRR_typ_2 220 243 IPR003591 -
Pvu8g2326 977 SMART LRR_typ_2 420 443 IPR003591 -
Pvu8g2326 977 SMART LRR_typ_2 172 196 IPR003591 -
Pvu8g2326 977 SMART LRR_typ_2 122 146 IPR003591 -
Pvu8g2326 977 SUPERFAMILY RNI-like 80 473 - -
Pvu8g2326 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Pvu8g2326 977 SMART serkin_6 678 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2326 977 PRINTS Leucine-rich repeat signature 125 138 - -
Pvu8g2326 977 PRINTS Leucine-rich repeat signature 565 578 - -
Pvu8g2326 977 SUPERFAMILY Protein kinase-like (PK-like) 653 968 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2326 Pvu-Chr8 53818794 53822337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2326 28 975 Receptor kinase-like Gene Family AT3G47570 43.320 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pvu8g2326 Pkinase 3.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2326 - - gmx:100777490 1509.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2326 8 53818794 53822337 Pvu8g2326 8 53818794 53822337 ECH