Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2310 ATGACGTTCAAGCGCAGGAATGGAGGTCGCAACAAGCACGGTCGCGGCCACGTCAAGTTCATTCGTTGCTCCAACTGCGGCAAATGCTGCCCTAAGGACAAGGCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAACAGGCTGCTGTCAGAGATGTGCAGGAGGCTTGTGTCTATGAGCAATACACGCTTCCCAAACTGTACGTGAAGATGCAGTACTGTGTTTCGTGTGCTATCCACTCTCATGTTGTTAGGGTTCGATCCCGCACTAACAGGAGGAAGCGTGATCCTCCTCAGCGATTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCACCTCGTCCCGCTGGTGCAGGAGCTCCTGTCCGAACCTGA 390 0.5385 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTNRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGAGAPVRT* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2310 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pvu8g2310 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Pvu8g2310 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pvu8g2310 129 MobiDBLite consensus disorder prediction 86 129 - -
Pvu8g2310 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pvu8g2310 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2310 Pvu-Chr8 53628816 53630877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2310 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 85.345 2.30e-70 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2310 K02976 - gmx:100781822 209.92