Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2302 ATGTCGATTCGCGATTCCCAAGCCTTCAATTGGCACTATGACGAGCTCGACGACCAGAACCTCGAAATCCGCGGCCGCAAGCTCTTCTTCATCATCGTCCTTTTCTCCATCGTCCTCCTCTTCACCGCGCTCTTCATCTTCGCGCGCCGGATCTGCCACCAGCACGGCCTCCTCTTCGACGCTGTCCCGTCTCACCACGCACCGCCGGTGCTTCCTTCTCATGACGGCCTCGACGCCGCCGCGATCAAGCGAATACCGATCATCCTTCACCAGCGCGCGGCGGCGGAGGAGTCGGAGTGCAGCATCTGCCTCGGCGCGTTCGTCGACGGCGCGAAGCTGAAGGCTCTCCCTGGATGCGAGCACAGGTTCCACAGCGAGTGCGTGGACAAGTGGCTCGTGAATCACTCCAATTGCCCTCTCTGCAGAGCCTCGGTGAAACTCGATCCTTCATTTCCGAGGATTTTGATCCAAGCGCCACCCGTTAGAACCGCTCTTCCTCTCTGA 504 0.5992 MSIRDSQAFNWHYDELDDQNLEIRGRKLFFIIVLFSIVLLFTALFIFARRICHQHGLLFDAVPSHHAPPVLPSHDGLDAAAIKRIPIILHQRAAAEESECSICLGAFVDGAKLKALPGCEHRFHSECVDKWLVNHSNCPLCRASVKLDPSFPRILIQAPPVRTALPL* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2302 167 Coils Coil 167 167 - -
Pvu8g2302 167 Pfam Ring finger domain 99 142 IPR001841 -
Pvu8g2302 167 SUPERFAMILY RING/U-box 86 149 - -
Pvu8g2302 167 PANTHER RING-H2 FINGER PROTEIN ATL66 3 157 - -
Pvu8g2302 167 SMART ring_2 100 141 IPR001841 -
Pvu8g2302 167 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Pvu8g2302 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 147 IPR013083 -
Pvu8g2302 167 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 157 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2302 Pvu-Chr8 53500144 53500882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2302 6 150 C3H Transcription Factor Family AT3G11110 43.046 1.64e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2302 - - gmx:100794554 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2528 1 50397046 50398534 Pvu8g2302 8 53500144 53500882 PCT