Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2300 ATGGGAAGCTCCGTGCGTGTAAAAGAAGCATCGGTGATTACACCTTCTGAACCCACTCCACGGGGCGTGCTCGCTCTATCAGCGCTTGATTCACAACTCTTCCTTCGTTTCACCATAGAGTATCTGTTAGTCTACAAGCCTTGCCCTGGCCTGGACCAGCCAAACACCACGGCCCGTCTCAAATCGGCATTAGCCCGGGCCCTGGTTCCCTACTACCCATTCGCTGGCCGGGTCAGGCCCAGGCCCGAAGGCCAGGGCCTGGAGGTGGTGTGTGCGGGCCAAGGAGCGGTGTTCATAGAAGCCTTCGCTGCCAGTTACAACGCCAACGACTTTGAAAAGGCGCCTAAAACAGTTACGCACTGGAGGCCGTTGTTGTCGCTCCACGTGGCAGATGTGCTGAAGGGCTCCCCGCCGCTGGTGGTTCAGCTGACCTGGCTCGTCGACGGCGCCGCCGCAATTGCCGTCGGAATCAACCACTGCCTCTGCGACGGCATCGGCAGCGCGGAGTTCCTCAACCACTTCGCAGAGTTAGCCAACGACAGACGCGAGACGAGTTACAGGCGCATACAGAAACCAGTTTGGGAGCGTCACCTTCTGAACCCACCGCATGGGAAGCAGACGCGGGTGGACTCAGAGAGTCATCCCGAGTTTAGCCGAGTCCCGGACCTATGCGGCTTCATGAACAAGGTCTCAACCGGGCTAAAACCAACCTCGATTACGTTCGATAAGACGCGGCTGAACGAGTTAAAGCGCGTGGCGCAGTGCACGAGCGAACCCGGCGAGTCGGCGCGGTACACTTCGTTCGAGGTGCTGGCAGCGCATGTGTGGAGAAGCTGGGCGAGAGCCATAGGGTTCCCGGGGAACCAGAGATTGAAGCTGGTGTTCAGTATGAACGTGCGGAAGCGTGTGAAGCCGGGTTTGCCCGAGGGGTATTATGGGAACGCATTTGTTTTGGGGTGTGCGGAGACGAGTGCGAGGGAGCTGGAGGAGAGAGGGGTGGGGTTCGGGTCGGGTTTGGTGAAGCGAGCGAAGGAGAGGGTGGGGAACGAGCACGTGAGGGAGGTGATGGAGTGGGTGTGGGAGATGAAACGGAGCCCCGACCCGGTTGGGGTGTTGATAGTGTCGCAGTGGTCGAGGCTAGGGTTGGAGAATATTGACGTGGGTTTGGGAAAGGCTTGGGAGGTGGGACCCGTGTGCTGCGACAGGTACTGTTTGTTCTTGCCGGTGAGGGATGACTCTGTGAGTGTGAAGGTCATGGTCGCTCTCCCCTCTTCCTCCGTTGACAATTACCACCTTTTCATGCGTTCCTCTCACCTGTGA 1320 0.5879 MGSSVRVKEASVITPSEPTPRGVLALSALDSQLFLRFTIEYLLVYKPCPGLDQPNTTARLKSALARALVPYYPFAGRVRPRPEGQGLEVVCAGQGAVFIEAFAASYNANDFEKAPKTVTHWRPLLSLHVADVLKGSPPLVVQLTWLVDGAAAIAVGINHCLCDGIGSAEFLNHFAELANDRRETSYRRIQKPVWERHLLNPPHGKQTRVDSESHPEFSRVPDLCGFMNKVSTGLKPTSITFDKTRLNELKRVAQCTSEPGESARYTSFEVLAAHVWRSWARAIGFPGNQRLKLVFSMNVRKRVKPGLPEGYYGNAFVLGCAETSARELEERGVGFGSGLVKRAKERVGNEHVREVMEWVWEMKRSPDPVGVLIVSQWSRLGLENIDVGLGKAWEVGPVCCDRYCLFLPVRDDSVSVKVMVALPSSSVDNYHLFMRSSHL* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2300 439 Gene3D - 228 431 IPR023213 -
Pvu8g2300 439 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 433 - -
Pvu8g2300 439 Pfam Transferase family 4 426 - -
Pvu8g2300 439 Gene3D - 2 218 IPR023213 -
Pvu8g2300 439 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2300 Pvu-Chr8 53471794 53473113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2300 5 434 Monolignol Biosynthesis Gene Families AT5G48930 26.009 2.79e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2300 - - gmx:100817048 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2300 8 53471794 53473113 Pvu8g2300 8 53471794 53473113 ECH
Pvu1g2530 1 50417584 50419586 Pvu8g2300 8 53471794 53473113 PCT