Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2296 ATGGAAAAGAAAAGGAAACTCAGTCGGTTGCAGGATCTTTATATAGCTTGGCGGCTTGTGGCGGTTTTTTTCTTGTTTCAGAACTTGGGTTTGTGCTGTTCTTTGAATGAAGAAGGTTATGCTCTTTTGAAGTTGAGGCAGAGAATAGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGGTTGATGATGAGGCGTCTTTTGACCCTTGTAATTGGTTTGGAGTTGAGTGCTCAGATGGAAGAGTTGTGGCCTTGAATTTGAAGGATCTCTGCCTTGGAGGAACTCTGGCACCTGAGCTTGTGAAACTTGTCCACATAAACTCCATTATTTTGCGGAACAACTCTTTCTCTGGGACCATCCCTGAAGGATTTGTGGAGTTAAAAGAATTGGAGGTTTTGGATTTGGGATACAACAACTTCAGTGGACTTCTACCAGCTGATCTTGGGAGTAATATCTCCCTGGCAATCCTTTTGCTGGATAACAATGAATTTCTTGTTGGTTTCTCTCCGGAAATCAATGAACTGAGGATGCTTTCTGAGTGCCAAGTAGATGAAAATCAGCTAACTTATGCTGCTAAAATGCCAGCTTGCATAGAAAGAGCCACCACATGGCATATTGGTCAAGGTAAAGGTACTACTCGTGGCCTACTTCAACGTCCAAAACTATTCCATCGTGAAAATAATGACTCTCGTAATCGTGCGGTTAATCCACCTCAAGAGAAGCCTTCTCCTCATTTACCAGTGCCAAAGCTAACTCCCCCTGAGAAAAATGCTTCTAGTTCTCCTTCTCCCCATTCTACACCAGGTTCTGGAGCACAATCCAAAACTGAAAAAAGCACTTCACCAAAGTTTCATATGTTGGTTGGAGTTATAGGTGGTGCAGTGTTTCTTCTTTTTTCATCCATTGGCATATATATTTGTAAAACAAAGGTGGCTAATGTCAGACCTTGGACCACGGGACTAAGTGGACAGCTTCAGAAGGCATTTGTAACTGGTGCGCAAAAGCTAAGGAGATTGGATCTTGAAGTAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCACCTATTGGCACACTGTACAAAGGAACTTTGTCTAGTGGAGTTGAAATAGCTGTAACTTCTGTTCCGGTGACATTATCCAAGAATTGGTCAAAGACTTTAGAAGTTCAATTTAGAAACAAGATAGATACGTTATCGAAAGTGAACCACAAGAATTTTGTCAATCTTATTGGATACTGTGAAGAAGAGGAGCCTTTCACCAGAATGTTGGTTTTTGAATATGCCCCAAATGGAACACTATTTGAGCATTTACACATAAAAGAGGCTGAGCACTTGGATTGGTTAACAAGGCTTAGAGTTGCAACGGGTATGGCTTACTGCTTGCAGCATATGCACCAATTGGATCCTCCTATGGCCCTTATCAAGCTGAATTCTCAAGCTGTTTACTTGACTGATGACTATGCTTCCAAACTCTCAGATTTGAGTTTCTCCTATGACATAACCTCAGCTGAGAGAAAAGCTATTGACGTGCCAAAAGCAACTCTTGAAAGTAATGTTTATAGCTTTGGTGTTTTGTTATTTGAGATGGTTACTGGTCGTCTCCCTTATTCAGTGGAACAAAGGGACTCACTTGAAAACTGGGCATCACACTATTTACAAGGAGACCAACCCCTCAAAGATATGGTGGATCCAATTCTTGTATCTTACCAAGAGGATCAGCTGGAACAAGTTGCTGCATTGATTAGATCTTGTGTGCACCCTGATCCAAAGCAAAGACCAACAATGAAAGATGTCAGTGAGAGACTAAGAGAGATAACAAAGATAACACCCGAATCAGCAGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTGTACATAA 1896 0.4135 MEKKRKLSRLQDLYIAWRLVAVFFLFQNLGLCCSLNEEGYALLKLRQRIVSDPFGALSNWVDDEASFDPCNWFGVECSDGRVVALNLKDLCLGGTLAPELVKLVHINSIILRNNSFSGTIPEGFVELKELEVLDLGYNNFSGLLPADLGSNISLAILLLDNNEFLVGFSPEINELRMLSECQVDENQLTYAAKMPACIERATTWHIGQGKGTTRGLLQRPKLFHRENNDSRNRAVNPPQEKPSPHLPVPKLTPPEKNASSSPSPHSTPGSGAQSKTEKSTSPKFHMLVGVIGGAVFLLFSSIGIYICKTKVANVRPWTTGLSGQLQKAFVTGAQKLRRLDLEVACEDFSNVIGTSPIGTLYKGTLSSGVEIAVTSVPVTLSKNWSKTLEVQFRNKIDTLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWLTRLRVATGMAYCLQHMHQLDPPMALIKLNSQAVYLTDDYASKLSDLSFSYDITSAERKAIDVPKATLESNVYSFGVLLFEMVTGRLPYSVEQRDSLENWASHYLQGDQPLKDMVDPILVSYQEDQLEQVAALIRSCVHPDPKQRPTMKDVSERLREITKITPESAVPKLSPLWWAELEIACT* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2296 631 Gene3D Phosphorylase Kinase; domain 1 319 428 - -
Pvu8g2296 631 MobiDBLite consensus disorder prediction 209 279 - -
Pvu8g2296 631 ProSiteProfiles Protein kinase domain profile. 346 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2296 631 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Pvu8g2296 631 PANTHER LRR RECEPTOR-LIKE KINASE 1 630 - -
Pvu8g2296 631 Gene3D Ribonuclease Inhibitor 34 205 IPR032675 -
Pvu8g2296 631 SUPERFAMILY Protein kinase-like (PK-like) 331 603 IPR011009 -
Pvu8g2296 631 Pfam Leucine rich repeat 106 163 IPR001611 GO:0005515
Pvu8g2296 631 MobiDBLite consensus disorder prediction 254 279 - -
Pvu8g2296 631 Pfam Protein tyrosine and serine/threonine kinase 349 603 IPR001245 GO:0004672|GO:0006468
Pvu8g2296 631 Gene3D Transferase(Phosphotransferase) domain 1 429 615 - -
Pvu8g2296 631 PANTHER PROTEIN MALE DISCOVERER 2 1 630 - -
Pvu8g2296 631 SUPERFAMILY L domain-like 37 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2296 Pvu-Chr8 53430154 53434271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2296 23 603 Receptor kinase-like Gene Family AT5G16000 26.349 7.45e-46 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pvu8g2296 PK_Tyr_Ser-Thr 8.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2296 - - gmx:100792450 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2536 1 50447480 50452182 Pvu8g2296 8 53430154 53434271 PCT