Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2281 ATGGGTGCTTATGATCAAGTTTCTCTGCGGCCTTTGGATTCTTCTAGAAAGAGGAAAAGTAGGAGCAGAGGGGATGGTTCTAGATCTGTTGCTGAGACTATTGCAAAGTGGAAGGAATACAATGAGCATCTTTATTCTGGCAAAGATGATGGAAGATCAACTCGTAAGGCACCAGCTAAAGGTTCAAAGAAAGGATGCATGAAAGGGAAAGGAGGACCCCAGAACTATCAGTGTAACTACAGAGGAGTTAGGCAGAGAACTTGGGGGAAATGGGTGGGTGAGATTAGGGAGCCAAATAGAGGGAGTAGGCTTTGGTTAGGAACCTTTTCTACTGCCCAAGAAGCTGCTCTTGCCTATGATGAAGCTGCTAGAGCCATGTATGGTCCATCTGCACGCCTCAACTTTCCCGACATCTCAGATTATGCTTCTGTCAAGGAATCGTTTAAGGACTCTTTCATGGCTGCTTCATCTTCATGTTCTTCGGCAGCATCGGACACTAGTACTACATCCAATCGATCAGAGGTTTGTGCAGCTGAGGATGCTAAGGAGAATACTCTACATGTGCTTGATAAGGTCAACCATAATGATTGTCACAGGGCTTATGACTATGCCTCACCAACTAGCAGAATGAAGCTAGAGCCGAAGGATGAGGCTGTGGATCGCCCAGAGCCAGGGGCTGGACAAGGAATACATCATACTGAGCAGGCAGAGGATGTAAATAAAGATCAGATGGACTTTTCATGGATTGATGCTTTCGATTTTAATGATGATTACTCGAAGAGCTTTTCCAATGATGAGTTATTTCAAGTGGATGAACTTTTGGGGCTTATAGATAATAACCCAGTTGATGACTCTGGGTTGATGCAAGGTTTGGATTTTGGACAAATAGGATTTCCTGGAGATAATAATCCTCAGGTTGGTGATACGTCATCAAGCTTTTTTTATCAGTTGCAAAATCCAGATGCCAAGTTGTTGGGAAGTTTGCCCCATATGGAACAGACACCATCTGGTTTTGATTATGGATTAGATTTCATGAAAACAGTTGTGCCAGATGAGTATAATGGAGGGGAAGAACCGCAGTTTCTTAATTTGGACGATGTCCTGAACCATGATTCAAAGGGAATGGAAGCAAGCAAGGAATGA 1143 0.4357 MGAYDQVSLRPLDSSRKRKSRSRGDGSRSVAETIAKWKEYNEHLYSGKDDGRSTRKAPAKGSKKGCMKGKGGPQNYQCNYRGVRQRTWGKWVGEIREPNRGSRLWLGTFSTAQEAALAYDEAARAMYGPSARLNFPDISDYASVKESFKDSFMAASSSCSSAASDTSTTSNRSEVCAAEDAKENTLHVLDKVNHNDCHRAYDYASPTSRMKLEPKDEAVDRPEPGAGQGIHHTEQAEDVNKDQMDFSWIDAFDFNDDYSKSFSNDELFQVDELLGLIDNNPVDDSGLMQGLDFGQIGFPGDNNPQVGDTSSSFFYQLQNPDAKLLGSLPHMEQTPSGFDYGLDFMKTVVPDEYNGGEEPQFLNLDDVLNHDSKGMEASKE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2281 380 Pfam AP2 domain 78 128 IPR001471 GO:0003700|GO:0006355
Pvu8g2281 380 MobiDBLite consensus disorder prediction 1 31 - -
Pvu8g2281 380 CDD AP2 78 137 IPR001471 GO:0003700|GO:0006355
Pvu8g2281 380 MobiDBLite consensus disorder prediction 11 26 - -
Pvu8g2281 380 PRINTS Ethylene responsive element binding protein signature 80 91 IPR001471 GO:0003700|GO:0006355
Pvu8g2281 380 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
Pvu8g2281 380 ProSiteProfiles AP2/ERF domain profile. 79 136 IPR001471 GO:0003700|GO:0006355
Pvu8g2281 380 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 11 352 - -
Pvu8g2281 380 SUPERFAMILY DNA-binding domain 79 137 IPR016177 GO:0003677
Pvu8g2281 380 MobiDBLite consensus disorder prediction 45 78 - -
Pvu8g2281 380 Gene3D AP2/ERF domain 79 137 IPR036955 GO:0003700|GO:0006355
Pvu8g2281 380 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 11 352 - -
Pvu8g2281 380 SMART rav1_2 79 143 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2281 Pvu-Chr8 53286141 53288298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2281 16 346 AP2-EREBP Transcription Factor Family AT2G40340 41.246 2.77e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pvu8g2281 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2281 - K09286 gmx:100800134 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2281 8 53286141 53288298 Pvu8g2281 8 53286141 53288298 ECH