Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2278 ATGGAGAGCAAGAACCTCACCTCAAAGTGTTTTTACCGTAAGCATTCTCAAAATGGGGTGAGGAATGCAGCAGATGGTTATTTTTTCCGCTTGTTTTTCTTTTTGTGGTTTATTGTGGTGCCAGTGTTTGGTGAAGAGCGTTGGGATGGAGTTGTTGTCACACAGTCAAACTTCCTCGCACTTCAGGCATTCAAGCAGGAGTTGGTTGATACTGAAGGATTTCTGAGAAGCTGGAATGACAGTGGCTATGGAGCTTGTTCTGGAGGTTGGGTTGGTATCAAGTGTGCCCAGGGACAGGTTATTGTGATCCAGCTTCCGTGGAAGGGGTTGAAGGGGCATATCACCGAGAGGATTGGCCAACTTCAGGGGCTTAGAAAGATTAGTCTCCACGATAACCAAATTGGTGGTTCGATCCCTTCAGCACTGGGACTTCTTCTCAACCTAAGAGGGGTTCAACTCTTCAACAATAGGTTCACAGGGTCCATCCCTCCTTCATTAGGTTCATGTCCTTTGCTTCAGTCTTTAGACCTCAGTAACAATCTGCTCAGCGGGACAATCCCAATGAGCCTTGGGAATGCCACTAAGCTTTATTGGCTTAACTTGAGTTTTAATTCCTTCTCTGGCCCAATACCAACTAGCTTAACTCGCTTAACTTCTCTCACCTACATATCTCTTCAACACAATAATCTCTCGGGCTCTATTCCTAACTCATGGGGTGGTAGCTTGAGGAACCACTTCTTTCGGCTCCAAAACCTGATCCTAGATCATAACTTCTTGAGTGGAAGCATTCCTGCTTCTTTGGGTGTCTTGAGTGAACTCACAGAAATTTCTCTTAGCCATAACCAGCTTAGAGGACCTATCCCAAATGAAATAGGAAGCCTTTATAGACTTAAGACTATAGATTTTTCTAGTAATGCATTGAATGGAAGCTTGCCCCCCACTCTCTCTAATGTATCCTCACTCACTCTCTTGAATGTAGAGAACAACCGCCTTGGCAATCAAATCCCAGAAGCTTTAGGCAGATTACACAATCTATCTGTTCTAGTTCTTAGCAGAAACCAATTCAGTGGCCACATTCCTCAAAGTATTGGAAACGTTTCAAAGCTTACACAGCTTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCAGCATCCTTCGAAGAGCTGCGTGGTCTTAATTTCTTCAACGTTTCTCATAACAACCTCTCTGGTCCAGTTCCAACCCTACTTGCCCATAAATTTAATTCAAGTTCATTTGTGGGAAATATTCAACTATGTGGATATAGCCCTTCTACCCTATGTCCCTCGCCAGCTCCTTTTGGTTCACCCACAGAAAACCATCGACACAAGAAACTAGGCACCAAAGACATAATTCTCATAGTAGCAGGATTGCTCCTTGTAGTCCTGATAACACTTTGCTGCATTCTGCTATTCTGCCTGATCAGAAAAAGGACAGCATCAAATGCAGAGGGTGGCCAGGCCACTGGGAGAGCATCTGCATCTGCTGCCAGGACAGAAAAAGGAGTCCCTCCTGTCGCAGGTGAAGCTGAAGCGGGTGGTGGTGAGGTTGGAGGTAAACTAGTCCATTTTGATGGACCATTGGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCAGAGATAATGGGAAAGAGTACGTATGGAACTGTGTACAAGGCTACATTAGAGGATGGAAGTCAAGCGGCAGTTAAAAGATTGAGGGAAAAGATTACGAAAGGTCAGAGAGAATTCGAATCTGAAGTTAGTGTTATAGGAAGAATTCGCCACCCAAATCTTTTGGCATTGAGAGCCTATTACTTGGGACCCAAAGGAGAAAAGCTTCTAGTGTTTGATTATATGCCTAAGGGAAGTCTTGCTTCTTTCCTACACGCTCGTGGGCCTGAAACAGCCATTGATTGGCCAACAAGGATGAAAATAGCACAGGGGATGGCTCGTGGCTTGTTACACCTTCATTCCAATGAGAATATTATACATGGGAACCTTACGTCCAGCAATGCGCTGTTGGATGAGAATACGAATGCTAAAATAGCTGATTTCGGCCTTTCTCGGTTGATGACAACTGCTGCAAATTCAAACGTGATTGCCACTGCTGGGGCATTGGGATACCGAGCACCTGAGCTCTCGAAGCTTAAGAAAGCCAACACAAAAACTGATGTATACAGTCTTGGTGTCATCTTGTTAGAACTCCTAACGGGGAAGCCACCTGGTGAGGCTTTGAATGGCGTGGATTTACCTCAGTGGGTTGCCTCCATTGTCAAAGAGGAGTGGACAAATGAAGTTTTCGATGTAGAGTTGATGAGAGATGCTTCAACATATGGCGACGAAATGCTAAACACGTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCAGCAAGTCCTTCAGCAGCTTGAAGAAATTAGACCGGAGATATCAGCCAGTTCGGGTGATGATGGAGCCATCCCTTCGACCAGCGAATGA 2505 0.4491 MESKNLTSKCFYRKHSQNGVRNAADGYFFRLFFFLWFIVVPVFGEERWDGVVVTQSNFLALQAFKQELVDTEGFLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLKGHITERIGQLQGLRKISLHDNQIGGSIPSALGLLLNLRGVQLFNNRFTGSIPPSLGSCPLLQSLDLSNNLLSGTIPMSLGNATKLYWLNLSFNSFSGPIPTSLTRLTSLTYISLQHNNLSGSIPNSWGGSLRNHFFRLQNLILDHNFLSGSIPASLGVLSELTEISLSHNQLRGPIPNEIGSLYRLKTIDFSSNALNGSLPPTLSNVSSLTLLNVENNRLGNQIPEALGRLHNLSVLVLSRNQFSGHIPQSIGNVSKLTQLDLSLNNLSGEIPASFEELRGLNFFNVSHNNLSGPVPTLLAHKFNSSSFVGNIQLCGYSPSTLCPSPAPFGSPTENHRHKKLGTKDIILIVAGLLLVVLITLCCILLFCLIRKRTASNAEGGQATGRASASAARTEKGVPPVAGEAEAGGGEVGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKGQREFESEVSVIGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGPETAIDWPTRMKIAQGMARGLLHLHSNENIIHGNLTSSNALLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEALNGVDLPQWVASIVKEEWTNEVFDVELMRDASTYGDEMLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPEISASSGDDGAIPSTSE* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2278 834 ProSiteProfiles Protein kinase domain profile. 544 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2278 834 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Pvu8g2278 834 Pfam Leucine rich repeat 344 403 IPR001611 GO:0005515
Pvu8g2278 834 Gene3D Phosphorylase Kinase; domain 1 550 621 - -
Pvu8g2278 834 SUPERFAMILY L domain-like 94 431 - -
Pvu8g2278 834 SMART LRR_typ_2 318 341 IPR003591 -
Pvu8g2278 834 SMART LRR_typ_2 270 294 IPR003591 -
Pvu8g2278 834 SMART LRR_typ_2 342 366 IPR003591 -
Pvu8g2278 834 SMART LRR_typ_2 121 145 IPR003591 -
Pvu8g2278 834 SMART LRR_typ_2 217 240 IPR003591 -
Pvu8g2278 834 MobiDBLite consensus disorder prediction 492 519 - -
Pvu8g2278 834 PRINTS Leucine-rich repeat signature 172 185 - -
Pvu8g2278 834 PRINTS Leucine-rich repeat signature 270 283 - -
Pvu8g2278 834 Pfam Protein tyrosine and serine/threonine kinase 547 812 IPR001245 GO:0004672|GO:0006468
Pvu8g2278 834 CDD STKc_IRAK 550 815 - -
Pvu8g2278 834 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 28 822 - -
Pvu8g2278 834 Gene3D Ribonuclease Inhibitor 57 166 IPR032675 -
Pvu8g2278 834 Gene3D Ribonuclease Inhibitor 243 439 IPR032675 -
Pvu8g2278 834 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 28 822 - -
Pvu8g2278 834 Gene3D Ribonuclease Inhibitor 167 242 IPR032675 -
Pvu8g2278 834 Gene3D Transferase(Phosphotransferase) domain 1 622 826 - -
Pvu8g2278 834 MobiDBLite consensus disorder prediction 815 834 - -
Pvu8g2278 834 Pfam Leucine rich repeat N-terminal domain 59 95 IPR013210 -
Pvu8g2278 834 SUPERFAMILY Protein kinase-like (PK-like) 548 816 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2278 Pvu-Chr8 53261226 53264542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2278 48 817 Receptor kinase-like Gene Family AT3G51740 64.615 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu8g2278 PK_Tyr_Ser-Thr 1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2278 - - gmx:100811174 1367.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2551 1 50572464 50575791 Pvu8g2278 8 53261226 53264542 PCT