Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2237 ATGGGGTTCACTGGGGAGTTGGTCAGAAGTGTCTTCTCCAAAAATCGTTCTGATGGGTCGCATGAAACCAAAATGATGAGACGCAATAGTGCTGAAAATGGAAGATGGTTATCTGTTAAGTCATACTTGTGTGGCGGTGAATTCAATTCAGTCCTTGCAGAGAATGATTCAGCTTCAGTTAAGAGCACTGAAGTCACGGTTTCACAGTCCATATTGGAAGACTTGAATGATGAAGGGGACACTGATAGTGAAGAAACTGTGGAGAATGTATCACAGAAAAGGCCAAATTCAGACTCCAAATCATTGACTGAGGAAGAAGCAGCTCTTCTTATTCAATCAACATACAGAGGCTTCCTGTTGAGGCGTGAAAATGGAGAAATCAGATCAGAAACAGGAAAAGAGGAGTTCAATTTAGTATCAGAAAGTCTTGATAGAAAGTCCATGGGCACATCAGTTGAAGTCCAAACTGCAAACTCCACTGAAGTTTTCTCGGTTGAAGGGGAAAAAAAGGGCATTTGCCACCGTATTCAGCGCAGGACCAGAAGTCAAGTAATAAAACAAAAGGAAGACTGGGATGACAGCACCGTAAGTAGTTATGTTTCAAAAATGAGGATGCAGAGTAGAATGGAGGCATCAACCAGAAGAGAAAGAGCACTGGCCTATGCTTTCTCACAACAGCTAAGAATCTGTTCAAAGAGAAAATTAACAAAACACAACAGCATGGAGTCAAATATGAGTTGGAGCTGGCTTGAGAGATGGATGGCAACACGCCTTCCAGAGACCTCATCAGTAGAAAGCCATGCCATGAAGCAATATGACCCTTCTAACAGTACTCACAAATTCACAATCATGACAAGATTTTTAGATGCTTCTGGGGAAGAAAAGGAGAGCTGCGGATCAAATGAGGTGCCCCTTCATTTTGATAACTACTCAATCAATTCACAAGAAGAAAAAGTTAGCTTCAAACCCCACATAACAAAGACCAACTTCAAGGCTAGGAGAACCGTTTCAAGGCGGAAAACAGTGCCAAGTTATCAGCTCTATGAAGAGCAGCAGCCAAAGGTAAGCAAGAGAGATGGTTGGGGCAACGCTTGCAAGGACATTAAGCAAAAACAAAAGCAAGTGGGAAGCAGGACAGAGATTACATTAAGCTCCTCGAAAGCTTCTAATGTGTAA 1176 0.4226 MGFTGELVRSVFSKNRSDGSHETKMMRRNSAENGRWLSVKSYLCGGEFNSVLAENDSASVKSTEVTVSQSILEDLNDEGDTDSEETVENVSQKRPNSDSKSLTEEEAALLIQSTYRGFLLRRENGEIRSETGKEEFNLVSESLDRKSMGTSVEVQTANSTEVFSVEGEKKGICHRIQRRTRSQVIKQKEDWDDSTVSSYVSKMRMQSRMEASTRRERALAYAFSQQLRICSKRKLTKHNSMESNMSWSWLERWMATRLPETSSVESHAMKQYDPSNSTHKFTIMTRFLDASGEEKESCGSNEVPLHFDNYSINSQEEKVSFKPHITKTNFKARRTVSRRKTVPSYQLYEEQQPKVSKRDGWGNACKDIKQKQKQVGSRTEITLSSSKASNV* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2237 391 ProSiteProfiles IQ motif profile. 104 133 IPR000048 GO:0005515
Pvu8g2237 391 PANTHER IQ-DOMAIN 5-RELATED 1 374 - -
Pvu8g2237 391 PANTHER IQ-DOMAIN 33 1 374 - -
Pvu8g2237 391 MobiDBLite consensus disorder prediction 368 391 - -
Pvu8g2237 391 Pfam IQ calmodulin-binding motif 106 123 IPR000048 GO:0005515
Pvu8g2237 391 MobiDBLite consensus disorder prediction 375 391 - -
Pvu8g2237 391 MobiDBLite consensus disorder prediction 75 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2237 Pvu-Chr8 52841184 52844357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2237 1 346 IQD Protein Family AT5G35670 40.000 1.20e-77 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2237 - - gsj:114383427 652.514