Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2230 ATGATTTCCCACCTCAATCAAAACCATCCCTTTCTTTTCTTCCATGGTTCATATAAAAAACCCCTATCCACACAAAACCCGTTTCCCCTTTCTCCCAAAGTTCCAACCTTTCCTAGTTCTACAGCTATCCCTGTTCTTCAAGTTTCAAGGGTGCATTCCATTCACTCACACTTTTCCGTGAAACGGTTATCTCGGCAGGTAAAGGGGAAAGTGCAGGATGTGCTGTTAGATTACTTGCATTCGAGCAGGGGATACAGCTTCGCGGATGCAGAGTTCATTAGCAAAAACTCACCATGTTTTGTTCAAGGTTTGGTGTCAGAGTTTCATGGACAAGATGATGATGTTGCCACGTGTTTAAGGAAGTCGTTGTGGTACAATCCCATTAATGAGTTTGAACCATTCTTTGAGAGTTTGGGGATTAGCTCTCGTGAGTTGCATTTGTTTCTTCCACGTGGAATGATGTATTTGTCTGATGATCGTGTTTTGCTTGCCAATTTCCACGCTTTGAGTAACTATGGAGTTCCAAGGAATAGAATAGGGAAAATTTATCGAGAGGCAAAGGAGGTTTTTGGGTATCCTAATGGATTGTTGTTGTCGAAATTTCGAGGTTATGAACATTTAGGTTTGAGTAGATCCATGGTCATCAAGCTTGTTGTTTGTTGCCCTTCACTTTTGGTTGGTGAAACAAGTGTTGAATTGGCCATGGTTCTGGATTGGTTGAAGAAAATTGGCATTGGGCATGATTGGATTGGAAATTACATGTCTTCTTTGAAAACATATTACCCAAGAAGAATGCTTGATGCTATGCAATTTCTTCATAAAGTGGGTTATTCTGAAGAACAGATGCACGATTTGTTCAAGGAAAACCCTGCATTATTACTGGAAGGTCTTGAGAAGAAGCTTTTTGTATTTTTGGGTCTAGCATTTAAGTTAGGTCTCAATAAGAACGTGATGTATTCTTGTTTTGTAGAATATCCCCATATCTTGACTAACAAGTGTGCAAAAAATCTTTTGGGAGTGATTGGCTTTTTGCGTTATGTTGGAATGGATGTAGATGAAATTTCGCGTATTTTGTCTAACCACATGCATCTTCTGAGCTCACATCCTTTGAAAGGCCCTAAAGTTGTTTGTTTGCAGTTAAAACTTAGAAAAGCTGATCTATACCAAATCATAAAGGATGATCCACTGAAGCTAATTAGTTTGGCTTCAAAACTGAAACAGAATACTGATTTACAGTTATTGCGTGATGACCAAAGTAAGCATTTGGGGAAGACAACATTCTTGCTGAAGTTGGGATATTCTGAGAACTCTGAGGAGATGACAAAAGCAATAAAAAGATTCCGAGGGAGAGGTGATCAATTACAAGAGAGGTTTGATTGCCTAGTTGAAGCTGGTTTGGACTATAACATTGCAATCAAAATGATAAAATGTGCTCCTATGATTCTAAACCAGAACAAAGTTGTGATTCAAAAGAAGATTGATTTCTTAAGAAACATTTTAGGTTACCCATTAGATTGCGTCGTTGCATTTCCAGCATACTTGTGCTATGATTTAGAGAGAATCATGCTCAGATTTTCAATGTATGCTTGGGTGGCAGAAAGGAAAGCAGTAAAACCTATGATGGCCTTGAGCACTATCCTCGCATCCTCTGATGAAAAGTTTGTAAAATACATTGTGAATGCACATCCTGAAGGTCCAATCATCTGGGATGATCTAAAGAAGTTATTGCTAAAAGATAAGAGCCAACTCTTCCCTTAA 1758 0.3868 MISHLNQNHPFLFFHGSYKKPLSTQNPFPLSPKVPTFPSSTAIPVLQVSRVHSIHSHFSVKRLSRQVKGKVQDVLLDYLHSSRGYSFADAEFISKNSPCFVQGLVSEFHGQDDDVATCLRKSLWYNPINEFEPFFESLGISSRELHLFLPRGMMYLSDDRVLLANFHALSNYGVPRNRIGKIYREAKEVFGYPNGLLLSKFRGYEHLGLSRSMVIKLVVCCPSLLVGETSVELAMVLDWLKKIGIGHDWIGNYMSSLKTYYPRRMLDAMQFLHKVGYSEEQMHDLFKENPALLLEGLEKKLFVFLGLAFKLGLNKNVMYSCFVEYPHILTNKCAKNLLGVIGFLRYVGMDVDEISRILSNHMHLLSSHPLKGPKVVCLQLKLRKADLYQIIKDDPLKLISLASKLKQNTDLQLLRDDQSKHLGKTTFLLKLGYSENSEEMTKAIKRFRGRGDQLQERFDCLVEAGLDYNIAIKMIKCAPMILNQNKVVIQKKIDFLRNILGYPLDCVVAFPAYLCYDLERIMLRFSMYAWVAERKAVKPMMALSTILASSDEKFVKYIVNAHPEGPIIWDDLKKLLLKDKSQLFP* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2230 585 SMART mt_12 215 246 IPR003690 GO:0003690|GO:0006355
Pvu8g2230 585 SMART mt_12 504 535 IPR003690 GO:0003690|GO:0006355
Pvu8g2230 585 SMART mt_12 472 503 IPR003690 GO:0003690|GO:0006355
Pvu8g2230 585 SMART mt_12 319 350 IPR003690 GO:0003690|GO:0006355
Pvu8g2230 585 SMART mt_12 180 210 IPR003690 GO:0003690|GO:0006355
Pvu8g2230 585 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 39 573 - -
Pvu8g2230 585 PANTHER CGI-12 PROTEIN-RELATED 39 573 IPR003690 GO:0003690|GO:0006355
Pvu8g2230 585 Gene3D Transcription termination factor 3, mitochondrial 303 565 IPR038538 -
Pvu8g2230 585 Gene3D Transcription termination factor 3, mitochondrial 117 301 IPR038538 -
Pvu8g2230 585 Pfam mTERF 452 554 IPR003690 GO:0003690|GO:0006355
Pvu8g2230 585 Pfam mTERF 269 406 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2230 Pvu-Chr8 52760623 52762519 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu8g2230 mTERF 4.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2230 - - gmx:100803162 688.337