Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2229 ATGCCTCCAAAACCCCCTCCACAACCAACCCCATCTTTCATTTCCCTCAAAGTTCGATGCTTTCGTGCTTCTGAGCCAAACCCAGTTCACGATTTTCCTCCTCCGAGTTCCGTTCTCTCGCCACGTTCCCTCAAACGGGTCCCTCGCCTCTTGAAGACCGAACTTCAACGCGCTCTAATGGATTACCTGCATTTCACGCGCGGCTACACCTTCTCCGACGCCGAGTACGTCAGCATGAACTCGCCTCGTTTTGTTGAATCATTGGTGTCAATGATTGACGACAAAGACGACGTTCCCCGATCGTTGCGGAAGTTCTTCAGGTACAACCCCATTAACGAGTTTGAACCGTTTTTCGAGAGTTTGGGAATTGACCCTTCTGAGTTGCATTTGTTTCTCCCCCATGGCATGATTTTCTTGGCTGATGATCACCTGTTACTTTATAATTTCCATGTTTTGTGTAACTATGGGGTGCCAAGGAATAGAATGGGCAGGTTTTATAGAGAAGCAAAAGAAATTTTTGGGTATGCTGGTGGGTTGTTGGAGTCAAAGTTGGAAGGTTATGGGAATTTAGGTTTGAGTAGATCAACTGTTGTGAAGCTTGTTGTTTGCTGTCCTTTGCTTTTGGTTGGTGATGTCAATTGTGAATTAGTTGTTGTGCTTGATTGGCTGAAAAGAATTGGGATTGAAAGTGATTGGATGGTGAATTACTTGTCTTGTTCAAGGACATATAGTTGGAAAAGAATGCTTGATACCTTGCAGTTTCTTAATAAAGTGGGTTATTCCGAGGAACAAATCCACAATTTGTTTAGGGGAAATCCTAAACTGTTGTTGGAAGGTATTGGGAAGAAGGTGTACTTATTTTTTGGTCGATTGGTCAAAGTGGGTGTTGAGATGAATGTGATTCATTCTTATTTTGTGGAGTATCCCAACGTCTTGTCATATAAGTGTGCGAATAATATGTTGAGAGTGATTGGCTTTTTGTGTGCTATTGGAATGGGAAAAGATGACATTGCTCACATTTTCTCTAAGTACGTGCATCTCTTGAGTACATGTTCCTTGAAAGGTCATAAAACTGTTTGTCAGGAGTTAAAAGTTGGAAAAGCTGATTTGTGCCAAATCATAAGGGATGATCCATTGAAACTAATTAGTTTTTCATCGAAGCAGCAACAGAAGAGCGATGGAAAGGTAGATAGTCATGACCCACGGAATTATTTAGAAAAAACAACTTTCTTACTGAAATTGGGATATACCGAAAACTCTGAAGAGATGGCAAGAGCATTAAGAATGTTCCGAGGGAGAGGTGATCAATTACAAGAAAGGTTTGATTGCCTGGTAGAAGCTGGTTTGGACTATAATAGTGTGATTGAAATGATAAAACGAGCTCCTATGATTCTAAGCCAGAACAAAGCTGTAATTAAAAGGAAGATTAATTTCTTAAGAAATGTTTTAGATTACCCACTAGAATGTCTCGTGGGATTCCCGACATACTTTTGCCATGATTTGGACAAAATTGTTGAAAGACTTTCAATGTATGCATGGCTGAAGGAGAGGAATGCCATAAATCCTACATTAACCTTGAGTACCATTGTTGCATCCAATGATAAACGCTTTGTAAAGTACTTTGTGAATGTGCATCCTCAAGGTCCAGCCGTCTGGAAGGGTTTGAAAAGGTTATCTAATAAAGATAAGAACTAA 1695 0.4047 MPPKPPPQPTPSFISLKVRCFRASEPNPVHDFPPPSSVLSPRSLKRVPRLLKTELQRALMDYLHFTRGYTFSDAEYVSMNSPRFVESLVSMIDDKDDVPRSLRKFFRYNPINEFEPFFESLGIDPSELHLFLPHGMIFLADDHLLLYNFHVLCNYGVPRNRMGRFYREAKEIFGYAGGLLESKLEGYGNLGLSRSTVVKLVVCCPLLLVGDVNCELVVVLDWLKRIGIESDWMVNYLSCSRTYSWKRMLDTLQFLNKVGYSEEQIHNLFRGNPKLLLEGIGKKVYLFFGRLVKVGVEMNVIHSYFVEYPNVLSYKCANNMLRVIGFLCAIGMGKDDIAHIFSKYVHLLSTCSLKGHKTVCQELKVGKADLCQIIRDDPLKLISFSSKQQQKSDGKVDSHDPRNYLEKTTFLLKLGYTENSEEMARALRMFRGRGDQLQERFDCLVEAGLDYNSVIEMIKRAPMILSQNKAVIKRKINFLRNVLDYPLECLVGFPTYFCHDLDKIVERLSMYAWLKERNAINPTLTLSTIVASNDKRFVKYFVNVHPQGPAVWKGLKRLSNKDKN* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2229 564 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 35 556 - -
Pvu8g2229 564 PANTHER CGI-12 PROTEIN-RELATED 35 556 IPR003690 GO:0003690|GO:0006355
Pvu8g2229 564 Gene3D Transcription termination factor 3, mitochondrial 97 285 IPR038538 -
Pvu8g2229 564 Gene3D Transcription termination factor 3, mitochondrial 286 553 IPR038538 -
Pvu8g2229 564 SMART mt_12 198 229 IPR003690 GO:0003690|GO:0006355
Pvu8g2229 564 SMART mt_12 487 518 IPR003690 GO:0003690|GO:0006355
Pvu8g2229 564 SMART mt_12 302 333 IPR003690 GO:0003690|GO:0006355
Pvu8g2229 564 SMART mt_12 420 450 IPR003690 GO:0003690|GO:0006355
Pvu8g2229 564 SMART mt_12 455 486 IPR003690 GO:0003690|GO:0006355
Pvu8g2229 564 Pfam mTERF 252 481 IPR003690 GO:0003690|GO:0006355
Pvu8g2229 564 Pfam mTERF 228 349 IPR003690 GO:0003690|GO:0006355
Pvu8g2229 564 Pfam mTERF 434 537 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2229 Pvu-Chr8 52749905 52751599 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu8g2229 mTERF 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2229 - - gmx:100803162 947.577