Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2222 ATGCGCCGAGGGAGACCCACCGCCGCTGTCGCCGCCGTCCATCCCTCGGCGGACCACCACCCTCCGCCCAAGGAGACGCGCTTCCGTGGAGTCAGGAAGCGCCCCTGGGGGCGATTCGCGGCGGAGATAAGAGATCCGTGGAAAAAACAGCGCGTCTGGCTCGGCACCTTCGATTCCGCAGAGGATGCCGCGCGGGCCTACGACGCCGCGGCCCGATCCTTCCGCGGGCCCAAAGCGAAGACCAATTTTCCTTTCCCCAACCCCGAGACAGACCACTCGCACTCGCAGATTCCGCTATACCAGGCCCACGGGCTCTCCAAGTTCGACCCGGTCCAGGTGAACCGGCCCACCACCAGCGGCATGAGCAGCACGGTCGAGTCCTTCAGCGGGCCTAGGGTTCCTTCCTCCTCCACTCTCCACCCTCGCAAGCCCGTCGTTAGCCCTGTTGTTATCCCTCCTCTCGACGATTGCCACAGCGATTGCGACTCTTCCTCCGTCGTTGAGGACGAGGACTGCGTCCTCACCTCCTCGTTCCGGCAACCGCTCCCCTTTGATCTCAACCTCCCGCCGCCCGGCGCCGACGATGACATCCCGGCCACCGTACTCTGCCTCTGA 615 0.6537 MRRGRPTAAVAAVHPSADHHPPPKETRFRGVRKRPWGRFAAEIRDPWKKQRVWLGTFDSAEDAARAYDAAARSFRGPKAKTNFPFPNPETDHSHSQIPLYQAHGLSKFDPVQVNRPTTSGMSSTVESFSGPRVPSSSTLHPRKPVVSPVVIPPLDDCHSDCDSSSVVEDEDCVLTSSFRQPLPFDLNLPPPGADDDIPATVLCL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2222 204 CDD AP2 26 84 IPR001471 GO:0003700|GO:0006355
Pvu8g2222 204 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Pvu8g2222 204 MobiDBLite consensus disorder prediction 117 141 - -
Pvu8g2222 204 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Pvu8g2222 204 SUPERFAMILY DNA-binding domain 27 85 IPR016177 GO:0003677
Pvu8g2222 204 MobiDBLite consensus disorder prediction 1 32 - -
Pvu8g2222 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 23 183 - -
Pvu8g2222 204 MobiDBLite consensus disorder prediction 18 32 - -
Pvu8g2222 204 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
Pvu8g2222 204 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Pvu8g2222 204 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Pvu8g2222 204 Pfam AP2 domain 26 76 IPR001471 GO:0003700|GO:0006355
Pvu8g2222 204 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 23 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2222 Pvu-Chr8 52704530 52705744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2222 1 195 AP2-EREBP Transcription Factor Family AT1G50640 47.273 1.19e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pvu8g2222 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2222 K09286 - gmx:100795557 269.626