Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2206 ATGGTCTTCACTAAGCTTTCATTAGTTATAAGTTCACTCTTAGTTCTTCATTTCTCCCCACTTTTCACCATTTTTTCTTTTGCTGCAACCACTGAAGAAAACCAAGTGAGGGAAGCAGGTGCTTTACTTGAGTGGAAAGCTAGCCTTGAAAACCAAAGCCAAGCTTCTCTGTCTTCATGGAGAAGAGGTGTGAGTCATTGCAACTGGAAAGAAATCATTTGTGACAAATCCAACTTTGTCACCACTATAAATGTAGCAAATCATGGCTTAAAAGGTACTCTTCACACTCTCAACTTCTCATCCTTTCCCAACCTGCTAACTCTGGATGTTAGTAACAATAGTTTCAGTGATACTATTCCTCACCAAATTGGTAACTTGTCCAAAGTTTCTCAGTTGATAATGAATAATAACAATTTTAGTGGTCCAATCCCCATTTCCTTGACGAAGTTGGCTACCTTGAAGATTCTAAACTTCAACTACAATAGCCTTTCTGGCCCTCTTCCTGAGGAGATTGCAGAATTGAGGAACTTAGAGCGTCTGTTATTTGAATCAAATCACCTTTCTGGTACCATTCCTCCAACAATTGGAAGGATGTCCAACCTTGTTGAACTTGATTTTCAACTTAACTCTATCAATGGTACAATCCACCCTTCAATTGGGAACTTGACAAATTTAAAATTCCTCAGGCTTCAACAAAATTATCTCTCTGGCTCCATTCCTTACTTCTTAGGAGACATGACCAATTTGATTGTTCTTGAAATCGATCAAAATAGATTAACAGGACCAATTCCTCCCCATATTGGAAACTTGACAAAGATGGTTAATCTGACCTTGGCCGCTAACATGCTTTCTGGACCAATTCCTCCTTCCCTTGGAAACTTGGTCAATCTAATGGCCTTAGAAATTTCCAGGAACAATCTTTCCGGAGTTATTCCTTCCACCTTGGGAAATTTGACAAACCCCATCTTTTTCGTTGTGCAAGAAAACAAACTTGAAGGCAGATTACCACCAGGAATGAATAACTTCACCAATTTAAAGAACTTACAACTAAGTGACAATAGTTTCACTGGCCCTCTGCCACAACAAATTTGCCTTGGAGGGTCGCTAGTCTTTTTCACTGCTAAAGAAAATCATTTCACGGGTCCAGTTCCAAAAAGCCTGAAAAATTGCTCCACTCTTGTTAGACTCAGACTAGATGGAAACCAGTTGAGTGGAAACATATCAGATGAATTTGGTGTTTATCCATTGTTGAACTACATTAGTCTGAGTAGGAATAATTTTTATGGCAGCATTTCCCCAAATTGGGCAAAGTGTCCTAATCTTTCAAGCCTTATAATGCCCAACAACAACTTATCTGGTAGTATACCACCAGAACTCAGCCAGGCACCCGTTTTAGAAGAACTTATCCTGTCTAAAAATCATTTAACAGGGAAGATTCCAAAAGAACTCGGGAAGTTGACCTCTTTGTTGAAGTTATCAGTAAGCAACAACGAACTTTCCGGCACCATTCCTACTGAAATAGGTGCTATGTCCAGCCTTGACACTTTGGAGCTTTCATCTAATAATTTAGTTGGTGCAATTCCAAAACAGTTGGGAGAGTTATTCAAGTTGCTTCACTTGAACTTGAGCAACAACAGATTGACAGAAAGCATTCCCTTGGAATTTGGCCGTTTGCAATCTCTTCAAAGTCTTGATCTCAGTGTCAATTTGTTAAATGGAGAAATACCATCTGCACTTGCAAGTATGCAAAGATTGGAAACGCTAAATCTCTCTCACAACAATCTCTCTGGAGTCATTCCGTCTAATTTCAAGGATGACTTGACAAAGGTTGACATATCTAGTAACCAATTGGAGGGTCCAATTCCTAACACTCGAGCCTTTCTCAATGCATCATTTGATGCATTGAAAGATAATAAAGGCTTGTGTGGAAATGTCTCCGGTTTGGTGCCTTGTAGCAGCAGTCGTAATGGTAAAGTGAAGATAAATGTCACCATGTTGGCATTAGTCCTTACTTTTGGTGCTCTGCTTCTAGTAGCACTCGTGGTTGGAGTTTTGTTATGTATTCGGTACAGAAGAGCAACAGAAAGCAAAAAGGAGGATGCTAAAGAAGAAAAAACTCAGGAGCATTATGCCATATGGAGTTATGATGGAAAATTAGTGTATGAAAATATCATTGAAGCCACAGAGGAGTTTGATGACAAATATCTCATTGGAGAAGGAGGGACTTCATCTGTTTATAAGGCTAAATTACCCACAGGACAGATTGTTGCTGTGAAGAAGCTTAAAGATGCACCCAATGAAGAAACACAGGATTTAAGAGCTTTTATGACTGAGGTTAAAGCCTTGGGAGAAATCAAGCATCGTAACATTGTGAAGTCACTAGGATATTGTTTACATCCACGTTACTCCTTTTTGGTTTATGAGTTCCTAGAGGGGGGTAGTTTGGATAAAGTACTCATCGATGATACACGTGCAACAATGTTTGATTGGAACACGAGGGTAAAGGTTGTTAAAGGTGTGGCAAATGCTTTGTACCATATGCATCATGGTTGCTTTCCTCCTATTATTCATCGAGACATATCAAGCAAGAATATTCTTATAGATTCAGAATACGTAGCTCGTATTTCTGACTTCGGAACAGCCAAAATTCTGAATCCTGATTCACGCAATTTAACCGCGTTTGCAGGCACATGTGGATATTCTGCACCAGAGCTTGCTTATACTATGGAAGTGAATGAAAAATGTGATGTGTTCAGTTTTGGAGTGCTTTGTTTGGAAATAATGATGGGAAATCATCCAGGAGATCTCATTTCATCGTTATTTTCACCCTCTGAAGCATCATCAGTGTACAATTTGTTGTTGAAGGATGTGTTGGACCAAAGACTACCTCTTCCAGTGAAGCCAGTTGTTGAGGAGGTGATCTTGATCGCCAAAATAACATTTGCTTGCTTAAGTGAAACTCCACGTTTTCGTCCAAGCATGGAGCAAGTGCATAACCATTTTCTGATGCCCGAATCATCTTCACTCAATTCACTCTCCATCATCACACTTGCTCAACTTGTCGATAATTGA 3072 0.3949 MVFTKLSLVISSLLVLHFSPLFTIFSFAATTEENQVREAGALLEWKASLENQSQASLSSWRRGVSHCNWKEIICDKSNFVTTINVANHGLKGTLHTLNFSSFPNLLTLDVSNNSFSDTIPHQIGNLSKVSQLIMNNNNFSGPIPISLTKLATLKILNFNYNSLSGPLPEEIAELRNLERLLFESNHLSGTIPPTIGRMSNLVELDFQLNSINGTIHPSIGNLTNLKFLRLQQNYLSGSIPYFLGDMTNLIVLEIDQNRLTGPIPPHIGNLTKMVNLTLAANMLSGPIPPSLGNLVNLMALEISRNNLSGVIPSTLGNLTNPIFFVVQENKLEGRLPPGMNNFTNLKNLQLSDNSFTGPLPQQICLGGSLVFFTAKENHFTGPVPKSLKNCSTLVRLRLDGNQLSGNISDEFGVYPLLNYISLSRNNFYGSISPNWAKCPNLSSLIMPNNNLSGSIPPELSQAPVLEELILSKNHLTGKIPKELGKLTSLLKLSVSNNELSGTIPTEIGAMSSLDTLELSSNNLVGAIPKQLGELFKLLHLNLSNNRLTESIPLEFGRLQSLQSLDLSVNLLNGEIPSALASMQRLETLNLSHNNLSGVIPSNFKDDLTKVDISSNQLEGPIPNTRAFLNASFDALKDNKGLCGNVSGLVPCSSSRNGKVKINVTMLALVLTFGALLLVALVVGVLLCIRYRRATESKKEDAKEEKTQEHYAIWSYDGKLVYENIIEATEEFDDKYLIGEGGTSSVYKAKLPTGQIVAVKKLKDAPNEETQDLRAFMTEVKALGEIKHRNIVKSLGYCLHPRYSFLVYEFLEGGSLDKVLIDDTRATMFDWNTRVKVVKGVANALYHMHHGCFPPIIHRDISSKNILIDSEYVARISDFGTAKILNPDSRNLTAFAGTCGYSAPELAYTMEVNEKCDVFSFGVLCLEIMMGNHPGDLISSLFSPSEASSVYNLLLKDVLDQRLPLPVKPVVEEVILIAKITFACLSETPRFRPSMEQVHNHFLMPESSSLNSLSIITLAQLVDN* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2206 1023 SUPERFAMILY L domain-like 377 643 - -
Pvu8g2206 1023 SMART LRR_typ_2 582 605 IPR003591 -
Pvu8g2206 1023 SMART LRR_typ_2 102 126 IPR003591 -
Pvu8g2206 1023 SMART LRR_typ_2 558 581 IPR003591 -
Pvu8g2206 1023 SMART LRR_typ_2 174 198 IPR003591 -
Pvu8g2206 1023 SMART LRR_typ_2 222 245 IPR003591 -
Pvu8g2206 1023 SMART LRR_typ_2 246 270 IPR003591 -
Pvu8g2206 1023 SMART LRR_typ_2 294 317 IPR003591 -
Pvu8g2206 1023 SMART LRR_typ_2 534 557 IPR003591 -
Pvu8g2206 1023 SMART LRR_typ_2 486 510 IPR003591 -
Pvu8g2206 1023 SMART LRR_typ_2 342 366 IPR003591 -
Pvu8g2206 1023 Pfam Protein kinase domain 733 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2206 1023 Gene3D Transferase(Phosphotransferase) domain 1 810 1011 - -
Pvu8g2206 1023 Gene3D Ribonuclease Inhibitor 326 654 IPR032675 -
Pvu8g2206 1023 ProSiteProfiles Protein kinase domain profile. 731 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2206 1023 SUPERFAMILY L domain-like 38 261 - -
Pvu8g2206 1023 Gene3D Phosphorylase Kinase; domain 1 691 809 - -
Pvu8g2206 1023 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Pvu8g2206 1023 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 5 1021 - -
Pvu8g2206 1023 Pfam Leucine Rich Repeat 584 604 IPR001611 GO:0005515
Pvu8g2206 1023 SUPERFAMILY Protein kinase-like (PK-like) 713 1001 IPR011009 -
Pvu8g2206 1023 Pfam Leucine rich repeat 512 571 IPR001611 GO:0005515
Pvu8g2206 1023 ProSiteProfiles Leucine-rich repeat profile. 584 605 IPR001611 GO:0005515
Pvu8g2206 1023 SUPERFAMILY L domain-like 185 477 - -
Pvu8g2206 1023 ProSitePatterns Protein kinases ATP-binding region signature. 737 760 IPR017441 GO:0005524
Pvu8g2206 1023 Gene3D Ribonuclease Inhibitor 35 195 IPR032675 -
Pvu8g2206 1023 Gene3D Ribonuclease Inhibitor 196 323 IPR032675 -
Pvu8g2206 1023 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 1021 - -
Pvu8g2206 1023 ProSitePatterns Tyrosine protein kinases specific active-site signature. 855 867 IPR008266 GO:0004672|GO:0006468
Pvu8g2206 1023 ProSiteProfiles Leucine-rich repeat profile. 536 557 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2206 Pvu-Chr8 52467571 52470845 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2206 25 903 Receptor kinase-like Gene Family AT4G08850 44.384 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu8g2206 Pkinase 7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2206 - - vra:106762950 1622.83