Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2203 ATGAGGTGCACAAAGCTTGTAACATTTCAGTTTATTCTCATCACGTTTTTCTTTTCACTTTTAAGATTCTCTTCCTTGGAAGTTTCTGGTGTTTCTTTAGCCAACGGTACTGTTATGGTTGGCTATGAAGCTGCTGAAGATGAAGACATTGAAGCAAGTGCTCTATTGAGGTGGAAAGCCAGCCTTGATAACCAAAGCCAGGTTTCCTTGTCTTCTTGGTCTACTTTTACTAGCCCTTGCAAATGGAAGGGAATAGTTTGTGATGAATCCAACTCTGTCAGCACTATAAATCTTGCAAAATTTGGACTAAAAGGTACACTTCTCAATCTCAGTTTCTCATCATTTCCAAAGCTTATGAGGTTGTGTTTAAGTTACAACAACCTCAATGGACCTATTCCCCGCGAAATTGGTAACATGTCCAAAATTTCTGAGTTGAAAATGGATCGTAATCATTTTAGTGATTCCATCCCCCAAGAAATAGGGGCACTGCATAACTTGGAGTATCTGTTCTTGAGAGAAAATCAACTTTCTGGCTCCATCCCCTCAACAATTGGAGTGTTGAAAAATCTTGTTACACTTGATTTATCATCCAACCATCTCTCTGGTACAATCCCTTCTGTTGGAAACTTAACAAATTTAGAACAACTTATCCTCCATAATAACCTTCTCTCTGGTCCTATTCCTGAGGAGTTGCGAGGACTTCATCTTCTCACAACAATCATTTTGTCAACAAATCAACTTTCAGGGCCAATCCCGTCTTCCATAGGAGACCTGGCTAATTTGAGGACACTTCAGCTCACTCGTAATAAACTACATGGATCAATTCCTTCCTCTCTTGGAAACTTGACAAAACTCATTAAATTGTCCATGTCTGACAACAAGCTTTCTGGATCAATTCCTGCTTCCATAGGAAACTTGGTCAATCTAGAAAAGTTTAACCTTGCAGTAAACAATCTTTCTGGACCTATTCCCTCTACCTTCAGATATTTGACCAAGCTTACCTTCCTATTACTTCATGTGAACAAACTTACTGGAAGTTTTTCAACAGCAACAAGTAACCTTACCAATTTAGTAAACTTGCAACTAAGCTCTAATCATTTTACTGGCCCTTTGCCACAATATATTTGCCTTGGAGGGTCACTTTTATTTTTTGCAGCCAATGAGAATCATTTGACTGGTCCAATTCCAACAAGTTTGAAGAACTGCTCCAGTCTTAAAAGGCTCAACCTTGCAGAAAATATGTTGATCGGAAATATTTCAAATGATTTTGGTGTATATCCAAATCTGGAGTACATTGATCTGAGTAGAAATGCCTTAAACGGTCAACTTTCATCAAATTGGGTCAAATGTCATAATCTCATAGGCCTAATGATCTCATACAATAATTTATTCGGTGGTATACCCCCAGAGCTAGGCCAGGCACCTAAATTACAAAAGCTTGAACTGTCTTCAAATCGTCTAACAGGAAAGATTCCAAAAGAACTTGGGAACTTGACCTACTTGTCTGAACTCTTCATAAGTAAGAACCAACTTTCGGGCAACATTCCCACTGAAATTGGTTCCTTAGAGCAACTTCAGTACCTTGATCTTGCAGCAAATGGTTTAAGTGGTCCAATCCCAAAACGGTTTGGAAGGTTGCACAAGTTATATCACTTGAACTTAAGCCATAACAAATTAATGGAAAGCATTCCATCTGAATTTAGCCAATTGCAATATCTTCAAAATCTTGATCTTAGTTGTAATTTTTTAAATGGAAAAATTCCAGCAGCACTTGGAAAATTGAAGATGTTGGAAAACTTGAACCTCTCCCACAACAATCTCACTGGAAACATTTCTTCCAGTTTCAAGGATATGATGAGTTTGACAAATGTTGACATATCTAACAACCAATTAGAGGGTCCAATTCCTAATAGTCGAGCCTTCCTTAACGCTCCATTTGAAGCATTGAAATCCAACAAAAACTTGTGTGGCTATGCTTCCGGGCTGATGCCTTGCCCGCGGTTGTTGAATCACAATCCTCGTGATAAAAAGGCCATGATGTTGGAAATTTTCCTTCCTTTGGGTGCACTATTTGTGGTTGGAGTTTCACTATATATTCATTTTGTAAAAGCAAGAAAAATAAAAAAGCTAGAGAAAGAAGAACAAGCTCGAGATCCTTTTTCTGTATTGCATTATGATGGCAAAATAATGTATGAAAATATCATCGAAGCAACAAATGATTTCGATGACAAATATCTCATCGGAAGAGGAGGGTTTGGATGTGTTTACAAAGCCATCTTACCCTCTGGCCACATTGTTGCTGTGAAAAAACTTCAAGTTGAAGTTGACAGGGAAAAGCTTGATTTTAAGGCTTTTACAACTGAAGTTCGAGCCTTGACAAAAATCAAACATCGTAACATTGTGAAGTTGCATGGGTTTTGTGAACATCCACGCCATTGTTTATTGGTTTATGAGTTCCTAGAATGTGGCAGCTTGGATAAAGTACTAAACAACGACACACATGCAGAAATGTTTGATTGGAATAAGAGGGTTAACGTTATTAAAGGTTTGGCAAATGCTTTGTATTACATGCATCATGGTTGCTCTCCTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTATAAGTTTGGAATATGAAGCTCGAATATCTGACTTTGGAACAGCAAAGATTCTAGATCCTAATTCACGAAATTTAACTTCGTTTGCTGGCACTTATGGATATGCTGCACCAGAGCTTGCTTATACCATGGAAGTGAATGAGAAATGCGATGTGTTCAGTTTTGGGGTGCTTTGTATGGAGATAATAATGGGAAATCATCCACGAGATCTCATTTCTTGGATGCATTCACCCTCTTCAACACCAGAGACATCTAATTTGCCATTGAAGGATGTGATAGACCAACGACTTCCTCTTCCAGTGATGCCAGTTGTGCTGGAGGTGGTCTTGATTGCAAAAGTGGCATTTGCTTGTTTGAATGAAAGACCATTTTCTCGTCCAACCATGGAAGATGTGTACAACAAGTTTGTGATGCCTAAGTCACCTTTAATGAGGGAGACACTCAACACCATTGTACTTGGACAACTTCAAAATCATTGA 3105 0.3845 MRCTKLVTFQFILITFFFSLLRFSSLEVSGVSLANGTVMVGYEAAEDEDIEASALLRWKASLDNQSQVSLSSWSTFTSPCKWKGIVCDESNSVSTINLAKFGLKGTLLNLSFSSFPKLMRLCLSYNNLNGPIPREIGNMSKISELKMDRNHFSDSIPQEIGALHNLEYLFLRENQLSGSIPSTIGVLKNLVTLDLSSNHLSGTIPSVGNLTNLEQLILHNNLLSGPIPEELRGLHLLTTIILSTNQLSGPIPSSIGDLANLRTLQLTRNKLHGSIPSSLGNLTKLIKLSMSDNKLSGSIPASIGNLVNLEKFNLAVNNLSGPIPSTFRYLTKLTFLLLHVNKLTGSFSTATSNLTNLVNLQLSSNHFTGPLPQYICLGGSLLFFAANENHLTGPIPTSLKNCSSLKRLNLAENMLIGNISNDFGVYPNLEYIDLSRNALNGQLSSNWVKCHNLIGLMISYNNLFGGIPPELGQAPKLQKLELSSNRLTGKIPKELGNLTYLSELFISKNQLSGNIPTEIGSLEQLQYLDLAANGLSGPIPKRFGRLHKLYHLNLSHNKLMESIPSEFSQLQYLQNLDLSCNFLNGKIPAALGKLKMLENLNLSHNNLTGNISSSFKDMMSLTNVDISNNQLEGPIPNSRAFLNAPFEALKSNKNLCGYASGLMPCPRLLNHNPRDKKAMMLEIFLPLGALFVVGVSLYIHFVKARKIKKLEKEEQARDPFSVLHYDGKIMYENIIEATNDFDDKYLIGRGGFGCVYKAILPSGHIVAVKKLQVEVDREKLDFKAFTTEVRALTKIKHRNIVKLHGFCEHPRHCLLVYEFLECGSLDKVLNNDTHAEMFDWNKRVNVIKGLANALYYMHHGCSPPIVHRDISSKNVLISLEYEARISDFGTAKILDPNSRNLTSFAGTYGYAAPELAYTMEVNEKCDVFSFGVLCMEIIMGNHPRDLISWMHSPSSTPETSNLPLKDVIDQRLPLPVMPVVLEVVLIAKVAFACLNERPFSRPTMEDVYNKFVMPKSPLMRETLNTIVLGQLQNH* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2203 1034 Gene3D Phosphorylase Kinase; domain 1 701 819 - -
Pvu8g2203 1034 Pfam Leucine rich repeat N-terminal domain 51 88 IPR013210 -
Pvu8g2203 1034 Gene3D Transferase(Phosphotransferase) domain 1 820 1020 - -
Pvu8g2203 1034 Gene3D Ribonuclease Inhibitor 163 232 IPR032675 -
Pvu8g2203 1034 Pfam Protein kinase domain 743 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2203 1034 ProSiteProfiles Protein kinase domain profile. 741 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2203 1034 SUPERFAMILY RNI-like 323 634 - -
Pvu8g2203 1034 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Pvu8g2203 1034 Gene3D Ribonuclease Inhibitor 354 666 IPR032675 -
Pvu8g2203 1034 SMART LRR_sd22_2 187 212 - -
Pvu8g2203 1034 SMART LRR_sd22_2 282 308 - -
Pvu8g2203 1034 SMART LRR_sd22_2 163 178 - -
Pvu8g2203 1034 SMART LRR_sd22_2 546 578 - -
Pvu8g2203 1034 SMART LRR_sd22_2 498 524 - -
Pvu8g2203 1034 SMART LRR_sd22_2 330 356 - -
Pvu8g2203 1034 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 1032 - -
Pvu8g2203 1034 Gene3D Ribonuclease Inhibitor 50 162 IPR032675 -
Pvu8g2203 1034 ProSitePatterns Tyrosine protein kinases specific active-site signature. 865 877 IPR008266 GO:0004672|GO:0006468
Pvu8g2203 1034 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 1032 - -
Pvu8g2203 1034 PRINTS Leucine-rich repeat signature 190 203 - -
Pvu8g2203 1034 PRINTS Leucine-rich repeat signature 594 607 - -
Pvu8g2203 1034 ProSitePatterns Protein kinases ATP-binding region signature. 747 770 IPR017441 GO:0005524
Pvu8g2203 1034 SUPERFAMILY L domain-like 60 395 - -
Pvu8g2203 1034 ProSiteProfiles Leucine-rich repeat profile. 548 570 IPR001611 GO:0005515
Pvu8g2203 1034 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Pvu8g2203 1034 Pfam Leucine rich repeat 260 319 IPR001611 GO:0005515
Pvu8g2203 1034 Pfam Leucine rich repeat 475 535 IPR001611 GO:0005515
Pvu8g2203 1034 SMART LRR_typ_2 210 234 IPR003591 -
Pvu8g2203 1034 SMART LRR_typ_2 258 281 IPR003591 -
Pvu8g2203 1034 SMART LRR_typ_2 522 545 IPR003591 -
Pvu8g2203 1034 SMART LRR_typ_2 475 498 IPR003591 -
Pvu8g2203 1034 SMART LRR_typ_2 594 617 IPR003591 -
Pvu8g2203 1034 SMART LRR_typ_2 282 306 IPR003591 -
Pvu8g2203 1034 SMART LRR_typ_2 546 570 IPR003591 -
Pvu8g2203 1034 SMART LRR_typ_2 354 378 IPR003591 -
Pvu8g2203 1034 SMART LRR_typ_2 163 187 IPR003591 -
Pvu8g2203 1034 Gene3D Ribonuclease Inhibitor 233 353 IPR032675 -
Pvu8g2203 1034 SUPERFAMILY Protein kinase-like (PK-like) 725 1010 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2203 Pvu-Chr8 52446534 52450034 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2203 51 913 Receptor kinase-like Gene Family AT4G08850 44.568 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu8g2203 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2203 - - gmx:100800924 1483.39