Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2185 ATGGAGAACAGATTCAGTTTATCAGTTTTCTTCATGTTATGGGCTATGGTGCTTAGTGCAGAATCCAAGTGTAGGAGGGACTGTGATTTAGCTCTAGCTTCCTACTATCTAACAGGAGGTGATTTGACATATATATCAAAGATTATGAAATCTCAGGTTGTTTCAAAAGCTGAAGATATTCTCCCCTACAACAGTGAAACCATAAAAAACAAAGACCAGGTGCAAGCCTTTACCAGAGTGAACGTTCCATTCCCTTGTGATTGCATTGGAGAGTTTCTTGGCCATATATTCCATTATGACGTTGTATCAGGTGACACTTACACGTCCATTGCCAGTCAGAATTATTCCGATTTGACCACTACTCAGTTGTTGCAGAACTTCAACTCATATTCACCAACTGGTATTCCTGATACCGTGACTCTTGATGTCTTCATTAACTGTTCCTGTGGGAATAGTGAAGTTTCCAAGGATTATGGATTGTTCATCACATACCCGCTTAGACCTGAGGATTCTTTGCAGTCAATTGCCAACGAGACTAGGATAGAAAGTGACTTGCTGCTTAAGTACAACCCCGGTGTGAATTTTAGCCAAGGGAGTGGTTTGGTTTATATTCCAGGGAAAGGTCTTGCACTTCGAGTTATCGCTGGAATATCTGTTGGAGTAGTAACGATACTTCTGCTATTGGCATTTTGTGTGTATGTTACATATTACCGAAGAAAGAAGAATTTGCTCCCAGAAGAATTCAGGATGAACTCGACTAGAGTTAAGAATGTTTCAGATGAAGCCTCTAGTGGCCCTGATGCAGAAAATGGAGCCAACACCATTAGGGTGGACAAATCAGGAGAGTTTTCATATGAAGAACTAGCCAATGCCACAAATAACTTCAATCTGGCTAATAAAATTGGTCAAGGTGGTTTCGGGGAAGTCTATTACGCAGAGCTTAATGGCGAGAAAGTTGCGGTAAAAAAGATGAACTTGCAAGCATCAAGAGAATTTTTAGCTGAACTGAAAGTGTTGACACGTGTTCATCACTTGAACCTGGTGCGCTTGATTGGATATTGTATCAAGGATTCCCTTTTCCTTGTTTATGAATACATTGACAATGGCAACTTAAGACAACATCTACGTGGATCAGGTTTTGATCCTTTGCCATGGTCAGCCCGAGTGCAAATTGCTCTGGATTCAGCCAGAGGTCTGCAGTACTTTCATGAGCATACTGTGCCTGCATATATCCATCGCGACATAAAGTCAGAAAACATTTTAATAGACAAAAAATTGTGTGCCAAGGTTGCAGACTTTGGTTTAACCAAGTTGATTGATGTTGGAAGTTCGTCACTTCACACAGCTAATATGAAGGGCACATTTGGTTACATGCCACCAGAATATGCATATGGCAATGTTTCTCCCAAAATAGATGTCTATGCTTTCGGAGTTGTTCTTTATGAACTAATTTCTGCTAAAGAAGCATTGTTCGTGGGTGGTGTACATGGTGCTGAATCAAAGGGCCTTGTGTCTTTGTTTGATGAAGTTTTTGATGAGCAAGATCCCACAGAAGGTCTTAAAAAACTGGTGGATCCTAGGTTAGGAGATAACTACCCAATCGATTCAGTTAGTAAGATGGCACAACTTGGAAAAGCATGCACAGAGAGTAATCCACAACAACGTCCAAATATGAGTTCTGTTGTGGTTACTCTCACAGCACTTACTTCAACTAGTGAGGATTGGGATATTGCTTCCATCATTGAAAATCCAACTCTAGCAAATCTAATGTCAGGGAAATAG 1782 0.4057 MENRFSLSVFFMLWAMVLSAESKCRRDCDLALASYYLTGGDLTYISKIMKSQVVSKAEDILPYNSETIKNKDQVQAFTRVNVPFPCDCIGEFLGHIFHYDVVSGDTYTSIASQNYSDLTTTQLLQNFNSYSPTGIPDTVTLDVFINCSCGNSEVSKDYGLFITYPLRPEDSLQSIANETRIESDLLLKYNPGVNFSQGSGLVYIPGKGLALRVIAGISVGVVTILLLLAFCVYVTYYRRKKNLLPEEFRMNSTRVKNVSDEASSGPDAENGANTIRVDKSGEFSYEELANATNNFNLANKIGQGGFGEVYYAELNGEKVAVKKMNLQASREFLAELKVLTRVHHLNLVRLIGYCIKDSLFLVYEYIDNGNLRQHLRGSGFDPLPWSARVQIALDSARGLQYFHEHTVPAYIHRDIKSENILIDKKLCAKVADFGLTKLIDVGSSSLHTANMKGTFGYMPPEYAYGNVSPKIDVYAFGVVLYELISAKEALFVGGVHGAESKGLVSLFDEVFDEQDPTEGLKKLVDPRLGDNYPIDSVSKMAQLGKACTESNPQQRPNMSSVVVTLTALTSTSEDWDIASIIENPTLANLMSGK* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2185 593 ProSiteProfiles Protein kinase domain profile. 295 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2185 593 Pfam LysM domain 99 134 IPR018392 -
Pvu8g2185 593 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 4 593 IPR044812 GO:0019199|GO:0045087
Pvu8g2185 593 SMART serkin_6 295 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2185 593 Gene3D Transferase(Phosphotransferase) domain 1 366 583 - -
Pvu8g2185 593 Gene3D Phosphorylase Kinase; domain 1 267 365 - -
Pvu8g2185 593 SUPERFAMILY Protein kinase-like (PK-like) 277 565 IPR011009 -
Pvu8g2185 593 Pfam Protein tyrosine and serine/threonine kinase 296 564 IPR001245 GO:0004672|GO:0006468
Pvu8g2185 593 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Pvu8g2185 593 PANTHER LYSM RECEPTOR KINASE 1B 4 593 - -
Pvu8g2185 593 CDD STKc_IRAK 301 568 - -
Pvu8g2185 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2185 Pvu-Chr8 52301886 52307003 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2185 7 593 Receptor kinase-like Gene Family AT3G21630 54.943 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pvu8g2185 PK_Tyr_Ser-Thr 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2185 - K13429 gmx:100803042 911.368