Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2156 ATGGGAGAAGGAAGTGACCATCAAGCTATGGCAGATGATGGGAATGTTGAACATATTGAAGGTGGAGTTAATAATGCTGAAAACAACTCTGGTTCTCATGTTGAGGTTGGGGTTTCTGAGCCGTATGTGGGTAGGGAGTTTGATTCTGAAGATGCTGCAAAGACTTTCTACAATGAGTATGCCAGACGAGTGGGTTTCAGCTGCAAAGCTGGCTCACATGGTCGTTCCAAAGCCGATGGGGAAAATATGTACTGGGAATTTGTCTGTGGCAGGGAGGATTTGAAAAGAAAACTTGCTGAAAGTTGCACTGCAATGATTAGGATCGAGAAGAAGGGTCAAAATAAGTGGGTTGTTACACAATTTGTGAAGGAGCATAGTCATTCCATGGCAAGCCTTAGTAAGGTGCATAGTATTAGGCCGCGCAGACACTTTTCTAGTGTGGGAAGAACCATGCCTGAAACTTACCAAGGAGTGGGGCTTGTTCCAAGTGGTGTGATGTATGTATCTATGGATAAGAATTGTATTCCCACTAAGAATATCCACGGGATTAGAAATATTCCTGCAGTTGCTACTATTTCTGAAACAGCTCACCTTGTTAAAAGTCCGTCAATGATGAATTATGCTGTTAGGCCAACTATTCAAAAGAGGACATTAGGGAGGGATGCTCACAACCTGCTGGAGTACTTTAAGAAAATGCAAGCTGAGAACCCTGGTTTCTTCTATGCAATACAACTTGATGATGATAATCACATGTCTAATGTGTTTTGGGCAGATGCGAGATCAAGGACTGCTTATGGTCATTTTGGTGATGCAGTTACTATGGACACAACTTACAGAATAAATCAATATAGAGTGCCCTTTGCTCTGTTCACTGGGGTAAACCATCATAGTCAGATGATTTTGTTTGGTTGTGCACTCCTCTTGGATGATTCCGAGGCTTCTTTTGTCTGGCTCTTCAAGACATTTTTGACAGCGATGAATGACCGTTACCCTGTCTCTATCACTACTGATCAAGACAGAGCTATACAAACAGCAATTTCACAAGTTTTCCCTCAAACACGCCACTGTATAAGCAAATGGCATGTCTTGCGAGAAGGCCATGAGAAGTTGGCTTATGTATGCAACATGCATCCAAATTTTCAGATTGAACTATATAATTGTATTAATCTGACAGAAACAATTGAGGAGTTTGATTCATGTTGGAATTTTATCATGAATAAATATGAACTCACAAAAAATGATTGGCTTCAGTCATTGTACAATGCTCGTGCACAATGGGTTCCAGCATATTTTCGTGATTCATTTTTTGCAGTAATATCTCCTAATCAAGGAATTGATGGCTCTTTTTTTTATGGTTTTCTCAACCATCAGGCAACATTACCAGTGTTCTTTAGGCAGTATGAACAAGCTTTAGAGAACTGGTTTGAAAAAGAATTAGAAACAGATTATGAGACAATTTCCTCCACCCCTGTCCTGAAGACACCTTCCCCAATGGAGAAACAGGCTGCTAATCTCTATACCCGGAAAATATTTTCAAAGTTTCAAGAAGAGCTAGTCGAGACCTTTGCTTATACAGCCAACAGAATTGAAGAAGATGGAGAAAGTAGCATATTCAGGGTTGCAAAATTTGATGATGACCAAAAGGCTTATGTTGTCACGTTAAACCTTTCTGAGTTGAGAGCTGACTGTAGTTGTCAAATGTTTGAGTACTCAGGCATTCTATGTAGACATGTTCTAACTGTTTTTACTGTAACTAATGTACTTACGTTACCATCTCATTATATTTTAAAACGGTGGACAAGAAATGCAAAAAGCAGTGAACATGCTGGTGAATCGCATGTACACGATTCTTTGGCATCACGATATAGCAATCTTTGTTGGGAAGCCATCAAATATGCTGAAGAAGGGGCAATGAATGTGGAAACACATGATACTGCAATTGGTGCTCTTAGAGAAAGTGCAAAGAAGATTTCTTTCATGAAGAGAAGTGTGGCCAAAGTTTCCCCACCTAGTCATCCCGTCAGTTGGACTGCTTATGATGACAGAAAATCCCCAACTTCAACAGCAGATACAAACCCTCTTTTGTGGCCACAGCAGGATGAAACAACAAAGAGGTTTAACCTTAATGATGCTAGTACTCCTGTTCAATCAGTTGCTGATTTAAATTTACCGCGAATGACTCCAGTGTCTCTTCAGCGCGATGATGGTCCACCTGAAAACATGGTGGTCTATCCCTGTCTGAAATCATTGACATGGGTAATGGAAAACAAGAACTCAACACCAGGGAATAGAGTGGCTGTTATCAATCTTAAGTTGCAAGATTATAGCAAGAATCCATCAACAGAATCGGAAGTTAAGTTTAATCTGTCAAAAGTTACTTTGGAACCGTTGTTTAACCATATGGTCAACATCAGAGATCAGCTTTCTGCGCCAACTAGGAAGTTTGCTGTATTAAATCTAAAGCTTCCAGTTGCCGATACAAATACTGGTGCGTGTGAAGTCAAGTTTCAGGTGTCCAAGGATACATTAGTTGCTGTACTACGGTCAATGGACTACATACGTGAGCAACTCTCTGTTCCTGGCGATGCGCAAACAGAAGCTATATCAAAAAGACCTCGGAAGTGA 2625 0.405 MGEGSDHQAMADDGNVEHIEGGVNNAENNSGSHVEVGVSEPYVGREFDSEDAAKTFYNEYARRVGFSCKAGSHGRSKADGENMYWEFVCGREDLKRKLAESCTAMIRIEKKGQNKWVVTQFVKEHSHSMASLSKVHSIRPRRHFSSVGRTMPETYQGVGLVPSGVMYVSMDKNCIPTKNIHGIRNIPAVATISETAHLVKSPSMMNYAVRPTIQKRTLGRDAHNLLEYFKKMQAENPGFFYAIQLDDDNHMSNVFWADARSRTAYGHFGDAVTMDTTYRINQYRVPFALFTGVNHHSQMILFGCALLLDDSEASFVWLFKTFLTAMNDRYPVSITTDQDRAIQTAISQVFPQTRHCISKWHVLREGHEKLAYVCNMHPNFQIELYNCINLTETIEEFDSCWNFIMNKYELTKNDWLQSLYNARAQWVPAYFRDSFFAVISPNQGIDGSFFYGFLNHQATLPVFFRQYEQALENWFEKELETDYETISSTPVLKTPSPMEKQAANLYTRKIFSKFQEELVETFAYTANRIEEDGESSIFRVAKFDDDQKAYVVTLNLSELRADCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKSSEHAGESHVHDSLASRYSNLCWEAIKYAEEGAMNVETHDTAIGALRESAKKISFMKRSVAKVSPPSHPVSWTAYDDRKSPTSTADTNPLLWPQQDETTKRFNLNDASTPVQSVADLNLPRMTPVSLQRDDGPPENMVVYPCLKSLTWVMENKNSTPGNRVAVINLKLQDYSKNPSTESEVKFNLSKVTLEPLFNHMVNIRDQLSAPTRKFAVLNLKLPVADTNTGACEVKFQVSKDTLVAVLRSMDYIREQLSVPGDAQTEAISKRPRK* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2156 874 Pfam MULE transposase domain 272 363 IPR018289 -
Pvu8g2156 874 Pfam SWIM zinc finger 550 584 IPR007527 GO:0008270
Pvu8g2156 874 SMART 26again6 561 588 IPR006564 GO:0008270
Pvu8g2156 874 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Pvu8g2156 874 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 799 IPR031052 GO:0006355
Pvu8g2156 874 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 30 799 - -
Pvu8g2156 874 Pfam FAR1 DNA-binding domain 55 129 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2156 Pvu-Chr8 51952375 51957937 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu8g2156 MULE 3.5e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2156 - - gmx:100807296 1550.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2156 8 51952375 51957937 Pvu8g2156 8 51952375 51957937 ECH
Pvu6g0084 6 4534201 4545268 Pvu8g2156 8 51952375 51957937 PCT