Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2152 ATGGAAGGTAATCTACCAACAGCAGCTGAAGGACAACCTTTGAGATGTAAAGCTGCCATTTGCCGCAAGCCAGGGTCTCCACTGAGTATTGAGGAGATCATTGTGGCACCTCCATTGCCTCGTGAAGTTCGGATTCGTGTTATATGCACCACTCTCTGTCATACCGATCTTACATATTGGAATTTGCAGGTCTCTCCGGAAAATTCTCCAAGAATCCTGGGTCACGAGGCTGTTGGGGTGGTGGAAAGTGTAGGCGAGGGTGTGACTGAAGTTAAAAAAGGAGATGTGGTTGTCCCAGTTTTCTTATCTGAATGTGGGGAGTGTATAGATTGCAAATCAAGCAAGAGCAATCTTTGTTCAAAGTTTCCTTTTGAGTTCTCTCCTGGGATGCCTAGAGATGGCACATCAAGATTCAAGAATTTAAAAGGAGAGATCATAGACCATTTCATGTTTGTTTCTAGTTTTACTGAGTACACTGTGGTTGACATTACCCAGCTAACCAAGATTGATCCAGCAATACCACCCAGCATAGCAAGCCTACTTAGTTGTGGTGTATCAACAGGAGTAGGTGCTGCTTGGAAGGCTGCAGGTGTGGAGCCAGGCTCTACAGTAGCTGTTTTTGGGTTGGGAACTATTGGATTAGCTGTTGTTGAGGGAGCTAGACTTTGTGGGGCAACTAAGATTATAGGTGTGGATATCAACCCAGCAAAACATGAAATTGGAAAAAAGTTTGGGGTCACTGACTTTATTCTTTCTGAAGAAAGTGAAGATAAATCTGTGAGCCAGATTATTATAGAGATGACTGATGGGGGAACAGACTATTCCTTCGAATGTGTTGGCAAGGCATCATTGATGGAAGAAGCATATGCTTCTTGTAGAAAGGCTTGGGGGAAAACAATGGTTGTAGGATTGGAAAAGCCAGGATCCAAGTTGAGCCTTGGCTGTCCTGAGTTACTGCTTAATGGGGGGAAGAGCCTGGAGGGATGCGTATTTGGAGGACTCAAACCAAAATCTCATGTACCTATTCTCATTAAACGCTACATGGATAAGGAACTGAACTTGGAGGACTTTGTCACACATGAGGTGCAGTTTCAGGATATCAATAAAGCTTTTGATTTATTGACTGAAAGAAAGAGTCTCCGATGTGTGATTTGGATGGACAAATGA 1167 0.4353 MEGNLPTAAEGQPLRCKAAICRKPGSPLSIEEIIVAPPLPREVRIRVICTTLCHTDLTYWNLQVSPENSPRILGHEAVGVVESVGEGVTEVKKGDVVVPVFLSECGECIDCKSSKSNLCSKFPFEFSPGMPRDGTSRFKNLKGEIIDHFMFVSSFTEYTVVDITQLTKIDPAIPPSIASLLSCGVSTGVGAAWKAAGVEPGSTVAVFGLGTIGLAVVEGARLCGATKIIGVDINPAKHEIGKKFGVTDFILSEESEDKSVSQIIIEMTDGGTDYSFECVGKASLMEEAYASCRKAWGKTMVVGLEKPGSKLSLGCPELLLNGGKSLEGCVFGGLKPKSHVPILIKRYMDKELNLEDFVTHEVQFQDINKAFDLLTERKSLRCVIWMDK* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2152 388 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Pvu8g2152 388 Gene3D - 188 329 - -
Pvu8g2152 388 Pfam Zinc-binding dehydrogenase 212 333 IPR013149 -
Pvu8g2152 388 PANTHER ALCOHOL DEHYDROGENASE 9 385 - -
Pvu8g2152 388 SUPERFAMILY GroES-like 9 194 IPR011032 -
Pvu8g2152 388 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 349 IPR036291 -
Pvu8g2152 388 Gene3D - 19 381 - -
Pvu8g2152 388 SUPERFAMILY GroES-like 337 385 IPR011032 -
Pvu8g2152 388 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 9 385 - -
Pvu8g2152 388 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2152 Pvu-Chr8 51932589 51936106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2152 42 376 Monolignol Biosynthesis Gene Families AT2G21730 25.664 4.68e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2152 K00121 - gmx:100806887 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2152 8 51932589 51936106 Pvu8g2152 8 51932589 51936106 ECH
Pvu8g2152 8 51932589 51936106 Pvu6g0104 6 5050860 5055698 PCT