Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2151 ATGGAACATAATCTACCAACAGCAACTGAAGGACAACCTTTGAGATGTAAAGCTGCCATTTGCCGCAAGCCAGGGTCTCCACTGAGTATTGAGGGGATCATTGTGGCACCTCCATTGCCTCGTGAAGCACGGATTCGTGTTATATGCACCACTCTCTGTCATACCGATCTTACATTTTGGAATTTGCAGGTCTCTCCTGAAAATTCTCCAAGAATCTTGGGTCACGAGGCTGTTGGGGTTGTGGAAAGTGTAGGAGAGGATGTGACTGAAGTTACAAAAGGAGATGTGGTTATCCCAATTTTCTTACCTGATTGTGGGGAGTGTATAGATTGCAAATCAAGCAAGAGCAATCTTTGTTCAAAGTTTCCTTTTGAGTTCTCTCCTTGGATGCCCAGAGATGGCACATCAAGATTCAAGAATTTAAAAGGAGAGATCATACATCATTTCTTGTGTATTTCTAGTTTTAGTGAGTACACTGTGGTTGACATTGCCTATCTAACCAAGATTGATCCAACAATACCACCTAACATGGCATGTCTACTTAGTTGTGGTGTATCAGTAGGAGTAGGTGCTGCTTCGATAACTGCAGGTGTGGAGCCAGGCTCTACAGTAGCTGTTTTTGGGCTGGGAAGTATTGGATTGGCCGTTGCTGAGGGAGCTAGACTTTGTGGGGCAACTAAGATTATAGGTGTGGATGTCAACCCAGAAAAATATGAAATCGGAAAAAAGTTCGGACTCACTGACTTTGTCCATGCTGGAGAAAGTGAAGATAAATCTGTGAGCCAGATTATCATAGAAATGACTGGTGGGGGAGCAGACTATTGCTTCGAATGTGCTGGCAAGGCATCATTGATGGAAGAAGCATATACTTCTTGTAGAAAGGGTTGGGGAAAAACAATAGTTTTAGGAATGGACAAGCCATCCAAGTTGACTCTTAGCTGTAGTGAGTTACTGGTGAGTGGGAAGAGCCTCAAGGGATGCTTATTTGGAGGACTCAAACCAAAATCTCATGTGCCTATTCTCATTAAACGCTACATGGATAAGGAACTGAATTTGGATGAGTTTGTCACACATGAGGTGCAATTTGAGGATATCAATAAAGCTTTTGATTTATTGATCGAAGGAAACAGTCTTCGATGTGTGATTTGGATGGACAAAGTGAGGATTTGA 1170 0.4256 MEHNLPTATEGQPLRCKAAICRKPGSPLSIEGIIVAPPLPREARIRVICTTLCHTDLTFWNLQVSPENSPRILGHEAVGVVESVGEDVTEVTKGDVVIPIFLPDCGECIDCKSSKSNLCSKFPFEFSPWMPRDGTSRFKNLKGEIIHHFLCISSFSEYTVVDIAYLTKIDPTIPPNMACLLSCGVSVGVGAASITAGVEPGSTVAVFGLGSIGLAVAEGARLCGATKIIGVDVNPEKYEIGKKFGLTDFVHAGESEDKSVSQIIIEMTGGGADYCFECAGKASLMEEAYTSCRKGWGKTIVLGMDKPSKLTLSCSELLVSGKSLKGCLFGGLKPKSHVPILIKRYMDKELNLDEFVTHEVQFEDINKAFDLLIEGNSLRCVIWMDKVRI* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2151 389 Pfam Zinc-binding dehydrogenase 212 331 IPR013149 -
Pvu8g2151 389 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Pvu8g2151 389 Gene3D - 19 379 - -
Pvu8g2151 389 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 9 383 - -
Pvu8g2151 389 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Pvu8g2151 389 SUPERFAMILY GroES-like 335 383 IPR011032 -
Pvu8g2151 389 PANTHER ALCOHOL DEHYDROGENASE 9 383 - -
Pvu8g2151 389 Gene3D - 188 327 - -
Pvu8g2151 389 SUPERFAMILY GroES-like 9 188 IPR011032 -
Pvu8g2151 389 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 347 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2151 Pvu-Chr8 51920751 51923868 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2151 42 376 Monolignol Biosynthesis Gene Families AT2G21730 23.677 1.46e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2151 K00121 - gmx:100806887 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2151 8 51920751 51923868 Pvu8g2151 8 51920751 51923868 ECH
Pvu6g0104 6 5050860 5055698 Pvu8g2151 8 51920751 51923868 PCT