Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2149 AATCTACCAACAGCAACTGAAGGACAACCTTTGAGATGTAAAGCTGCCATTTGCCGCAAGCCAGGGTCTTCACTGAGTATTGAGGAGATCATTGTGGCACCTCCATTGCCTCGTGAAGCTCGGATTCGTATTATATGCACCTCTCTCTGTCATACTGATGTTACATTTTGGAATATGCAGGTTCCTCCTGAAACTTCTCCAAGAATCTTGGGTCACGAGGCTGTTGGGGTTGTGGAAAGTGTAGGAGAGGATGTGACTGAAGTTACAAAAGGAGATGTGGTTGTCCCAATTTTCTTACCTGATTGTGGGGAGTGTATAGATTGCAAATCAAGCAAGAGCAATCTTTGTTCAAAGTTTCCTTTCGAGTTCGCTCCTGGGATGCCTAGAGATGGCACATCAAGATTCAAGAATTTAAAAGGAGAGACCATAGAACATTTCATGTTTGTTTCTAGTTTCAGTGAGTACACTGTGGTTGACATTGCCCATCTAACCAAGATTGATGCAGCAATACCACCCAACATGGCATGCCTACTTAGTTGTGGTGTATCAACAGGAGTAGGTGCTGCTTGGATAGCTGCAGGTGTGGAGCCAGGCTCTACAGTAGCTGTTTTTGGGCTGGGAAGTATTGGATTAGCTGTTGCTGAGGGAGCTAGACTTTGTGGGGCAACTAAGATTATAGGTGTGGATGTCAACCCAGAAAAATACGAAATTGGAAAAAAGTTTGGACTCACTGACTTTGTCCATGCTGGAGAAAGTGAAGATAAATCTGTGAGCCAGGTTATCATAGAGATGACTGATGGAGGAGCAGACTATTGCTTCGAATGTGTTGGCAAGACATCATTGATGGAAGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAACAATAGTTTTAGGATTGGAAAAACCAGGATCCAAGTTGAGCCTTAGCTGCAGTGAGGTACTGGTTAGTGGGAAGAGCCTGGAGGGATGCTTATTTGGAGGACTCAAACCAAAGTCTCATGTACCTATTCTCGTTAAACGCTACATGGATAAGGAACTGAATTTGGATGAGTTTGTCACACATGAGGTGCAGTTTCAGGATATCAATAAAGCTTTTGATTTATTGATTCAAGGAAACAGTCTTCGATGTGTGATTTGGATGGACAAATGA 1155 0.4312 NLPTATEGQPLRCKAAICRKPGSSLSIEEIIVAPPLPREARIRIICTSLCHTDVTFWNMQVPPETSPRILGHEAVGVVESVGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNLCSKFPFEFAPGMPRDGTSRFKNLKGETIEHFMFVSSFSEYTVVDIAHLTKIDAAIPPNMACLLSCGVSTGVGAAWIAAGVEPGSTVAVFGLGSIGLAVAEGARLCGATKIIGVDVNPEKYEIGKKFGLTDFVHAGESEDKSVSQVIIEMTDGGADYCFECVGKTSLMEEAYASCRKGWGKTIVLGLEKPGSKLSLSCSEVLVSGKSLEGCLFGGLKPKSHVPILVKRYMDKELNLDEFVTHEVQFQDINKAFDLLIQGNSLRCVIWMDK* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2149 384 SUPERFAMILY GroES-like 6 191 IPR011032 -
Pvu8g2149 384 PANTHER ALCOHOL DEHYDROGENASE 6 381 - -
Pvu8g2149 384 Pfam Alcohol dehydrogenase GroES-like domain 38 165 IPR013154 -
Pvu8g2149 384 SUPERFAMILY GroES-like 333 381 IPR011032 -
Pvu8g2149 384 Gene3D - 185 325 - -
Pvu8g2149 384 Pfam Zinc-binding dehydrogenase 209 329 IPR013149 -
Pvu8g2149 384 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 6 381 - -
Pvu8g2149 384 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Pvu8g2149 384 Gene3D - 16 377 - -
Pvu8g2149 384 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 345 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2149 Pvu-Chr8 51911675 51915071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2149 39 374 Monolignol Biosynthesis Gene Families AT2G21730 24.079 2.52e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2149 K00121 - gmx:100806887 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2149 8 51911675 51915071 Pvu8g2149 8 51911675 51915071 ECH
Pvu6g0105 6 5056828 5058366 Pvu8g2149 8 51911675 51915071 PCT