Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2144 ATGGTTGGAGTAGGAGCTACAAGGAAAGGCATGCAGGCTATCTGGTTGATGCTATTGCTGTTGGTGTCTATTGCATTGGGGAATTCAGATATTGATGCTCTCCTTGAATTTAAGAAAAGTATTCAGAATGACCCTTCTGGATTTGTTTTTAATTCTTGGAATTCCAAGTCTTTAGATTCGGATGGATGTCCTAGGAACTGGTATGGAATATGGTGTAGTGAAGGCAGTGTTATATCAATCACTCTGGATAATGCTGGTTTGGTTGGTGAGTTTAATTTCCCGGCAATTAGTGGCCTTGCAATGCTTCGCAATTTGTCAGCTGTGAACAACCAGTTCACAGGAGAGCTCACACATGCTGCTACAATGGAATCACTTGAATATCTTGATTTGTCCCTCAACAAGTTTAATGGACCGTTACTCTCTAACTTCGTTCAGTTGCGCAAGTTAGTATATCTGAATCTTTCTTCTAATGAACTTGGAGGCACTCTTACTATTGAGTTTCACAAACTTGAGCAGTTGAAGTATTTAGATATGCACATGAATAACTTTTCTGGGGATATTATGCATATCTTTTATCAGATGAGCAGTGTGCTATATGTTGACTTAAGCAGCAACAGCTTCTCTGGTGCACTGGACTTGGGACTTGTAGATGAATCTTTTCTCTCCTCAATTCAATATTTAAATGTTAGCCACAATTCCTTGAAAGGTGAGTTATTTGCTCATGATGGTATGCCATACCTTGACAGTTTAGAGGTCTTTGATGCTAGTAATAATCAGTTAGAGGGTAATATACCTTCCTTTACTTTTGTGGTATCTCTTCGGATTCTTCGACTTGCCTTCAACCAGCTGACTGGTTTGCTGCCAGAAGCCCTATTGAAGGAAAGTTCAATGATGTTGTCTGAACTTGATCTTAGTCAAAACAAGCTTGAAGGTCCCATTGGAATTATTACCTCGGTGACTCTGAGGAAGCTTAATTTATCTTCAAACAAGTTGTATGGCCCCTTACCTCTCAGGGTAGGCCATTGTGCTGTCATAGATTTGAGTAATAACACACTGTCAGGTAATTTCTCAAGGATTGGATATTGGGGTAACTATGTGGAAGTTGTTCAGCTAAGTACCAACACATTGATAGGAATGCTTCCAAACGAAACTTCTCAATTTTTAAGGTTAACTGAACTTAAGGCATCCAATAACTTATTGGAGGGCTTTCTCCCACCAATTTTGGGAACATATCCAGAACTAAAGGAGATCGATCTTAGCCTCAACCAGCTTTCTGGGGTCCTCCTGCCAAGCTTTTTTTACTCAACCAAATTGATTAATCTTAATCTCTCCAACAATAAGTTTTCTGGATTAATTCCTATTCAAGTTCAACCTCCTAATACTCCACTAGTTTCTACTGAAAATATTAGTCTGGTGTTTCTTGATCTTTCACACAACAACTTGAGTGGGACTCTTCCTTCAAATATGAGCAGCCTTCACAATTTATCATATCTCAATTTATGCAACAACAAATTGGAAGGTACTATTCCTGATGACCTTCCAGATGAGTTGAGAGTATTAAATGTGTCCTTCAATAATTTTTCCGGTGTTGTACCTGAAAACATAAAGCATTTTCCTGAATCGGCATTTCATCCAGGAAATCCTATGCTGGTGTTTCCTCTTTTGCAATCATCACCAAAAGATACTTCCAACCTAGGTTTGAGGGAACATCGGTTACATAAAAGGTCTGCCACTAGAATTGCCCTGATTGCATCTTTGGTTGCTGGTGCTTTTGTGATGGCTTTTGTGGGCATAATAATTTATTATAAGGTTCATCATGAAAAAGAAATTACTTCTAAACAAAATGAAGCAAGAGGCATCACTCAAGAGAGTACTTTCACATCAAATATAGAGGCAGCTTACAGAAATTTGGAAGCATTACCACCTTCTCAAAGGGGCTCTTCTGATGCTGCAAGCAATATTCATCCAGTGGGAGAGAAGCCTATGAATCTTGGCCGTAGTGAGTTAGGTAAGAAGGCGGAAGGAATGTATTCCCCAATGTCTATTTTATCACCTTCAAATCCTTCATCTTCTAAAAGCCATCAGTTTGAGAATCCTGGTTCCCTCCAAGTATCCTCTCCAGATAAACTGGTTGGAGACTTGCATATATTTGATGGGTCCTTGGTACTAACTGCGGAAGAACTTTCATGTGCTCCAGCAGAAGTTATTGGCAGGAGTTGCCATGGAACACTTTACAAAGCGACACTTGACTCTGGTCATCATGCATTGGCTATCAAATGGTTAAGAGAAGGAATAACCAAAGGAAAAAAGGAGTTGGCAAGGGAAATAAAGAAACTAGGGACTATCAAGCATCCAAACCTGGTTTCTATTCAGGGTTACTATCTGGGGCCAAAGGAACATGAAAAACTGATCATATCAAATTACATGAATGCACAATCTTTGGACATTTATCTCCATGAAGTAGATAAAACAAATCTCCATCCTTTGACTCTTGATGAAAGGCTGAGGGTGGCTACAGAGGTGGCGCTATGTCTACATTTCTTACACGATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATTTTGCTAGAAACTCCCAACAGAAATGTCCTCCTCACAGACTACAGCCTGCACAGGATACTCACTGCAGCAGGTACTACCGAGCAAGTTCTGAATGCCGGTGCACTCGGTTACCGGCCTCCGGAGTTTGCTAGATCAAGCAAGCCATGCCCTTCTTTGACAAGTGATGTTTATGCATTTGGAGTGGTCTTGTTAGAGCTCCTAACAGGAAGAAATTCTGGAGAAATAGTTTCTGGGATTCCTGGGGTGGTTGACCTCACTGACTGGGTGAGGTTTTTGGCTGAACAAGACCGTTCAAGCCAGTGCTTTGATAGGTCTCTAGTGGACAAGCATAATGGGGAAAAATCCTCAAAAGTTCTTGATGACATGCTAAAGGTGGCTCTTAGATGCATCCTTCCAGCATCTGATAGGCCTGACATGAAAACCGTCTTTGATGATCTCTCAACAATAAGCACTCAACAGGCATTATAA 3060 0.4052 MVGVGATRKGMQAIWLMLLLLVSIALGNSDIDALLEFKKSIQNDPSGFVFNSWNSKSLDSDGCPRNWYGIWCSEGSVISITLDNAGLVGEFNFPAISGLAMLRNLSAVNNQFTGELTHAATMESLEYLDLSLNKFNGPLLSNFVQLRKLVYLNLSSNELGGTLTIEFHKLEQLKYLDMHMNNFSGDIMHIFYQMSSVLYVDLSSNSFSGALDLGLVDESFLSSIQYLNVSHNSLKGELFAHDGMPYLDSLEVFDASNNQLEGNIPSFTFVVSLRILRLAFNQLTGLLPEALLKESSMMLSELDLSQNKLEGPIGIITSVTLRKLNLSSNKLYGPLPLRVGHCAVIDLSNNTLSGNFSRIGYWGNYVEVVQLSTNTLIGMLPNETSQFLRLTELKASNNLLEGFLPPILGTYPELKEIDLSLNQLSGVLLPSFFYSTKLINLNLSNNKFSGLIPIQVQPPNTPLVSTENISLVFLDLSHNNLSGTLPSNMSSLHNLSYLNLCNNKLEGTIPDDLPDELRVLNVSFNNFSGVVPENIKHFPESAFHPGNPMLVFPLLQSSPKDTSNLGLREHRLHKRSATRIALIASLVAGAFVMAFVGIIIYYKVHHEKEITSKQNEARGITQESTFTSNIEAAYRNLEALPPSQRGSSDAASNIHPVGEKPMNLGRSELGKKAEGMYSPMSILSPSNPSSSKSHQFENPGSLQVSSPDKLVGDLHIFDGSLVLTAEELSCAPAEVIGRSCHGTLYKATLDSGHHALAIKWLREGITKGKKELAREIKKLGTIKHPNLVSIQGYYLGPKEHEKLIISNYMNAQSLDIYLHEVDKTNLHPLTLDERLRVATEVALCLHFLHDEKAIPHGNLKSTNILLETPNRNVLLTDYSLHRILTAAGTTEQVLNAGALGYRPPEFARSSKPCPSLTSDVYAFGVVLLELLTGRNSGEIVSGIPGVVDLTDWVRFLAEQDRSSQCFDRSLVDKHNGEKSSKVLDDMLKVALRCILPASDRPDMKTVFDDLSTISTQQAL* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2144 1019 SMART LRR_typ_2 270 293 IPR003591 -
Pvu8g2144 1019 SMART LRR_typ_2 146 169 IPR003591 -
Pvu8g2144 1019 SMART LRR_typ_2 492 516 IPR003591 -
Pvu8g2144 1019 SMART LRR_typ_2 221 241 IPR003591 -
Pvu8g2144 1019 SUPERFAMILY Protein kinase-like (PK-like) 733 1010 IPR011009 -
Pvu8g2144 1019 MobiDBLite consensus disorder prediction 641 665 - -
Pvu8g2144 1019 SUPERFAMILY L domain-like 41 352 - -
Pvu8g2144 1019 Pfam Leucine rich repeat N-terminal domain 28 73 IPR013210 -
Pvu8g2144 1019 Gene3D Ribonuclease Inhibitor 219 561 IPR032675 -
Pvu8g2144 1019 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 1014 - -
Pvu8g2144 1019 Pfam Protein tyrosine and serine/threonine kinase 734 1006 IPR001245 GO:0004672|GO:0006468
Pvu8g2144 1019 Gene3D Ribonuclease Inhibitor 146 218 IPR032675 -
Pvu8g2144 1019 Gene3D Ribonuclease Inhibitor 29 145 IPR032675 -
Pvu8g2144 1019 MobiDBLite consensus disorder prediction 680 704 - -
Pvu8g2144 1019 SUPERFAMILY L domain-like 344 537 - -
Pvu8g2144 1019 PANTHER OS07G0626500 PROTEIN 11 1014 - -
Pvu8g2144 1019 ProSiteProfiles Protein kinase domain profile. 730 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2144 1019 Gene3D Phosphorylase Kinase; domain 1 736 809 - -
Pvu8g2144 1019 Gene3D Transferase(Phosphotransferase) domain 1 810 1018 - -
Pvu8g2144 1019 MobiDBLite consensus disorder prediction 678 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2144 Pvu-Chr8 51860563 51865813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2144 148 539 Receptor kinase-like Gene Family AT1G55610 29.782 1.34e-23 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu8g2144 PK_Tyr_Ser-Thr 3.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2144 - - gmx:100809980 1763.43