Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2138 ATGCAGGAGATGTCTTCTTTCGAGACAAATGGAACTGAGAATGAGGGTTCTCTGCCTCCCCCACCACCTGCTATCCCATCAGATGTTGTTCCTGTCAAACTGGAGCCTGAAAAGAAAAAGGTTTTGAGGCTTCCAATAGCCAGACGTGGCCTTGCTTCTAAAGGGACGAAGTTGCGACTTCTCACCAATCACTTCAGAGTGAATGTTGGAAACACTGATGGTCACTTTTTTCAGTATAGTGTATCTCTTTCTTATGAAGATGGACGTCCGGTAGAGGGCAAGGGTGTAGGGAGAAAGGTGCTTGACAGGGTGCAGGAGACATATAATTCTGAATTGAACGGGAAGAATTTTGCTTATGATGGCGAGAAAACGCTTTTTACACTTGGCTCTCTCGCCCGCAACCGGCTTGAGTTTACTGTTGTTCTGGAGGATGTTGTTTCTACTAGCAGAAGTAATGGAAATGTCAGCCCTGATGGAAATGGAGAATTAAGTGAGGGTGACAAGAAGAGAATGAGGCGCCCAAATAGAGCTAAAAGTTTTAAAGTTGAGATAAGTTTTGCTTCAAAGATTCCATTGCAGGCCATTGTCAATGCTCTCCGTGGACAGGATTCTGATAATTATCAAGAAGCTATAAGAGTTCTTGATATCATTCTAAGGCAGCATGCTGCTAAACAAGGCTGTTTGCTTGTGCGCCAGTCATTCTTCCATAATGATCCGAAGAATTTTACTGATGTAGGAGGAGGTGTGCTTGGCTGCAGGGGATTCCATTCTAGTTTTCGAACCACACAGAGTGGCTTGTCACTTAATATTGATGTCTCAACCACAATGATAGTTACTCCTGGGCCTGTGGTGGACTTCCTCATTTCCAATCAGAATGTAAAAGGTCCATTTAATCTCGACTGGGTTAGGGCCAAGAGGACCCTGAAAAATTTGAGGATTAAAGCAAGTCCATCCAATCAAGAGTATAAAATAACCGGACTTAGTGACAAGCCTTGCAATGAGCAACTGTTTACATTGAAGAAAAAGGGTGGAGTGGATGGTGATGATACTGAGGAGGTGACTGTGTATGATTATTTTGTTAATCATCGAAACATAGAACTCCGCTACTCGGGTGATCTTCCATGTATTAATGTTGGAAAGCCCAAGCGGCCAACATATTTTCCTCTTGAGCTCTGCTCTTTGGTATCCCTTCAACGTTACACGAAAGCTCTATCCACACTCCAAAGGTCCTCATTGGTGGAGAAGTCCAGGCAGAAGCCTCAGGAGAGGATGAGAGTCTTGACAGATGCTTTGAGTCGAAGCAATTATGGTTCTGAACCTATGCTTCGCAATTGTGGTATTTCTATTAGCTCTGGCTTTACTGAAGTTGAAGGTCGGGTTTTACAAGCTCCAAGGTTAAAGTTTGGAAATGGGGAGGACTTCAATCCTAGAAATGGGAGATGGAACTTTAATCAAAAGAAATTAGTTAGGCCAACAAAAATTGAAAAATGGGCTGTGGTTAACTTTTCTGCCCGATGTGATGTACGGGGACTTGTTAGGGATCTCCAAAAGTGCGGTCAAATGAAAGGAATTGCAATCGAACCACCTTTTGATGTATTTGAAGAAGATGGTCGCAATAGACGATCCCCACCTCTTGTTAGAGTGGAGAAAATGCTTGAATTCGTGCAGTCTAAACTTCCTGGGGCTCCGCAATTTCTTCTTTGTCTGCTTCCTGAGAGAAAAAATTCTGATCTTTATGGTCCGTGGAAGAAGAGAAATCTTGCTGATTTTGGAGTTGTTACCCAGTGCATAGCTCCACAAAAGGTCAATGATCAATATTTAACTAATGTTTTATTGAAGATCAATGCTAAGCTTGGAGGCTTGAATTCATTGTTAGGCGTTGAACATGCTCCTTCCATCCCCGTTGTTTCCAAAGCTCCCACCATCATTATTGGCATGGATGTGTCTCATGGCTCCCCAGGGCAAACAGATATTCCTTCAATTGCAGCGGTGGTTAGCTCTCGAGAGTGGCCCCTAATATCAAAGTACAGGGCATGTGTCCGTACCCAGTCTCCGAAGGTTGAAATGATTGACAATTTGTTTAAGAAAGTATCTGAAGAGGTGGATGATGGCATAATTAGGGAGCTACTACTTGATTTCTATAAAAGTTCTGGGAATAGAAAGCCTGAAAATATAATCATCTTCAGAGATGGTGTTAGTGAGTCCCAGTTCAATCAAGTTTTAAACATCGAACTTGACCAAATTATTGAGGCTTGCAAGTTTTTAGATGCTACTTGGGATCCCAAATTTTTGGTCATTGTTGCTCAAAAAAACCATCATACTAAATTCTTTCAAGCTGGTTCTCCTGACAATGTTCCTCCTGGAACTGTAATTGATAGCAAAATTTGTCATCCTCGGAACTATGATTTTTACATGTGTGCACATGCTGGAATGATAGGTACAAGTAGACCCGCACATTATCATGTTTTGTTAGATGAGATTGGGTTTTCAGCCGATGATCTGCAGGAGCTTGTACACTCCTTATCATACGTGTATCAGAGGAGCACCACGGCCATATCTGTCGTTGCTCCAATCTGTTATGCTCACTTGGCTGCTACTCAGATGGGTCAGTTTATGAAATTTGAGGAAAGATCGGAGACAGCTTCTAGTCATGGTGGTGCTCACACTGTCCCTCAATTGCCTAGACTGAATGATAATGTCTCTAGCTCAATGTTCTTCTGCTGA 2724 0.4255 MQEMSSFETNGTENEGSLPPPPPAIPSDVVPVKLEPEKKKVLRLPIARRGLASKGTKLRLLTNHFRVNVGNTDGHFFQYSVSLSYEDGRPVEGKGVGRKVLDRVQETYNSELNGKNFAYDGEKTLFTLGSLARNRLEFTVVLEDVVSTSRSNGNVSPDGNGELSEGDKKRMRRPNRAKSFKVEISFASKIPLQAIVNALRGQDSDNYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFTDVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVTPGPVVDFLISNQNVKGPFNLDWVRAKRTLKNLRIKASPSNQEYKITGLSDKPCNEQLFTLKKKGGVDGDDTEEVTVYDYFVNHRNIELRYSGDLPCINVGKPKRPTYFPLELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLTDALSRSNYGSEPMLRNCGISISSGFTEVEGRVLQAPRLKFGNGEDFNPRNGRWNFNQKKLVRPTKIEKWAVVNFSARCDVRGLVRDLQKCGQMKGIAIEPPFDVFEEDGRNRRSPPLVRVEKMLEFVQSKLPGAPQFLLCLLPERKNSDLYGPWKKRNLADFGVVTQCIAPQKVNDQYLTNVLLKINAKLGGLNSLLGVEHAPSIPVVSKAPTIIIGMDVSHGSPGQTDIPSIAAVVSSREWPLISKYRACVRTQSPKVEMIDNLFKKVSEEVDDGIIRELLLDFYKSSGNRKPENIIIFRDGVSESQFNQVLNIELDQIIEACKFLDATWDPKFLVIVAQKNHHTKFFQAGSPDNVPPGTVIDSKICHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEERSETASSHGGAHTVPQLPRLNDNVSSSMFFC* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2138 907 ProSiteProfiles Piwi domain profile. 565 873 IPR003165 GO:0003676
Pvu8g2138 907 Pfam N-terminal domain of argonaute 57 218 IPR032474 -
Pvu8g2138 907 MobiDBLite consensus disorder prediction 1 15 - -
Pvu8g2138 907 CDD Piwi_ago-like 440 867 IPR045246 -
Pvu8g2138 907 SUPERFAMILY Ribonuclease H-like 549 871 IPR012337 -
Pvu8g2138 907 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 4 906 - -
Pvu8g2138 907 Pfam PAZ domain 284 412 IPR003100 GO:0005515
Pvu8g2138 907 MobiDBLite consensus disorder prediction 149 176 - -
Pvu8g2138 907 SMART DUF1785_2 228 280 IPR014811 -
Pvu8g2138 907 Pfam Piwi domain 566 873 IPR003165 GO:0003676
Pvu8g2138 907 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 4 906 - -
Pvu8g2138 907 MobiDBLite consensus disorder prediction 1 28 - -
Pvu8g2138 907 Pfam Argonaute linker 2 domain 422 468 IPR032472 -
Pvu8g2138 907 Gene3D - 632 907 IPR036397 GO:0003676
Pvu8g2138 907 ProSiteProfiles PAZ domain profile. 300 396 IPR003100 GO:0005515
Pvu8g2138 907 Pfam Mid domain of argonaute 475 528 IPR032473 -
Pvu8g2138 907 CDD PAZ_argonaute_like 280 395 - -
Pvu8g2138 907 SUPERFAMILY PAZ domain 275 436 IPR036085 GO:0005515
Pvu8g2138 907 SMART Piwi_a_2 565 873 IPR003165 GO:0003676
Pvu8g2138 907 Gene3D paz domain 274 400 - -
Pvu8g2138 907 Pfam Argonaute linker 1 domain 230 277 IPR014811 -
Pvu8g2138 907 Gene3D - 460 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2138 Pvu-Chr8 51801232 51809026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2138 48 907 Eukaryotic Initiation Factors Gene Family AT5G43810 35.841 2.61e-166 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2138 K11593 - gmx:100779439 1590.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2138 8 51801232 51809026 Pvu8g2138 8 51801232 51809026 ECH