Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2137 ATGTCTTCTTTTGGGACAAATGGAACTGAGAATGAGGATTCACTGCCTCCGCCACCACCTACTATCCCAGTGGATGTAGTGCCTGTCAAAGTAGAGAGTGATAAGAAAAAGATTTTAAGGCTTCCAATAGCTAGACGTGGCCTTGCTTCTAAGGGGACGAAGTTGCGACTTCTTACCAATCACTTCAGAGTGAATATTGGAAACACTGATGGTCACTTTTTTCAGTATAGTGTATCTCTTTGTTACGAAGATGGACGTCCTGTAGAGGGTAAGGGTGTAGGGAGAAAGGTGCTCGAAAGGTTGCAGGAAACATATAATTCTGAATTGAACGGGAAAGATTTTGCTTATGATGGCGAGAAAACTCTTTTTACACTTGGCTCTCTTGCCCGTAATCGTCTTGAGTTTACGGTTGTTCTTGAGGACGTTGTTTCTAATGGCAGAAATAATGGAAATGTCAGCCCTGATGGAAATGGAGAATTCAGTGAGAATGACACAAAGAGAATGAGGCGCCCAAATAGAGCCAAAACCTTTAAAGTTGAGATAAGTTTTGCTTCAAAGATTCCATTGCAGGCCATTGCCAATGCTCTCCGTGGACAGGATTCTGATAATTATCAAGAAGCAATAAGAGTTCTAGATATCATTCTGAGGCAGCATGCTGCTAAACAAGGCTGTTTGCTTGTGCGCCAGTCATTCTTCCATAATGATCCAAAGAATTTTGCTGATGTAGGAGGAGGTGTCCTTGGCTGCAGGGGATTCCATTCTAGTTTTCGAACCACACAGAGTGGCTTGTCACTTAATATAGATGTCTCAACCACAATGATAGTTACTCCTGGACCTGTGGTGGACTTCCTCATTTCCAATCAGAATGTACAAAGGCCATCTGATCTCGACTGGGTTAGGGCCAAGAGGACCCTGAAAAATTTGAGGATTAAAGCAAGTCCATCCAATCAAGAGTATAAAATTACTGGGCTCAGTGAATTTTCTTGCCAAAAGCAGAAGTTTACATTGAAGAAAAAGGGTGGAGTGGATGGTGATGATACTGAGGAGGTGACGGTGTATGATTATTTTGTTAATCATCGAAATATAAATCTCCGCTACTCGGGGGATCTCCCATGTATTAATGTGGGGAAGCCCAAGCGGCCAACATATCTTCCTCTTGAGCTTTGCTCTTTGGTATCCCTTCAACGTTACACGAAAGCTCTATCCACACTCCAAAGGTCCTCATTGGTAGAGAAGTCCAGGCAGAAGCCGCCAGAGAGGATGAGAGTGTTGACAGATGCTTTGAGTCGTAGCAATTATGGTTCTGAACCTATGCTTCGTAATTGTGGTATTTCTATCAATCCTAGCTTTACTGATGTAGAAGGTCGAGTTTTACAGGCTCCAAGGTTAAAATTTGGAAATGGGGAGGATTTCAATCCAAGAAATGGGAGGTGGAACTTCAATCAAAAGAAACTAGTTAAGCCAACAAAAATTGAGAAATGGGCTGTGGTTAACTTTTCTGCCCGATGTGATGTACGAGGACTTGTCAGGGATCTCCTCAAGTGCGGTCAAATGAAAGGAATTGAAATCGAACCACCTTTTGATGTATTTGAAGAAGATGGTCGCAATAGACGATCCCCACCTCTTGTTAGAGTGGAGAAAATGCTTGAATTCGTGCAGTCTAAACTTCCTGGGGCTCCTCAATTTCTTCTTTGTCTTCTTCCTGAAAGAAAAAATTCCGATCTTTATGGTCCGTGGAAGAAGAGGAATCTTGCTGATTTCGGAGTTGTTACCCAGTGCATAGCGCCTCAAAGGGTCAATGATCAATATTTAACTAATGTTTTACTGAAGATCAATGCTAAGCTTGGTGGCCTGAATTCTATGTTAGGAGCTGAACATTCTCCTTCCATCCCTATTGTTTCCAGAGCTCCCACCATCATCATTGGCATGGATGTGTCTCATGGCTCCCCAGGGCAAACAGATATTCCTTCAATTGCAGCGGTGGTTAGCTCTCGAGAGTGGCCCCTAATATCAAAGTACAGGGCATGTGTCCGTACCCAGTCTCCCAAGGTTGAAATGATTGACAATTTGTTCAAGAAAGTCTCTGATGGAGTGGATGAAGGCATAATTAGGGAGCTGCTGCTTGATTTCTATAGGAGTTCTGGGAATAGAAAGCCTGACAACATAATCATTTTCAGGGATGGTGTCAGTGAGTCCCAGTTCAATCAAGTTTTAAATATCGAGCTTGATCAAATTATTGAAGCTTGCAAGTTTTTAGATGAAAAGTGGAATCCCAAATTTTTGGTTATTGTTGCTCAAAAGAACCATCATACTAAATTCTTTCAAGCCGATTCTCCTGACAACGTTCCTCCTGGAACTGTTATTGATAACAAAATTTGTCATCCTCGGAACTATGATTTTTACATGTGTGCACACGCTGGAATGATTGGTACTAGTAGACCTACACACTATCATGTTCTGTTAGATGAGATTGGGTTTAAAGCCGATGACCTGCAGGAGCTTGTGCACTCGTTATCATACGTGTATCAGAGGAGCACCACTGCTATATCCGTTGTTGCTCCAATTTGTTATGCTCACTTGGCTGCTACTCAGATGGGACAGTTTATGAAATTTGAGGAGAGATCGGAGACAGCTTCAAGTCATAGTGGTGCTCACCCTGTTCCTCAGTTGCCTAAATTGAATGATAATGTCTCTAGCTCAATGTTCTTTTGTTGA 2715 0.4232 MSSFGTNGTENEDSLPPPPPTIPVDVVPVKVESDKKKILRLPIARRGLASKGTKLRLLTNHFRVNIGNTDGHFFQYSVSLCYEDGRPVEGKGVGRKVLERLQETYNSELNGKDFAYDGEKTLFTLGSLARNRLEFTVVLEDVVSNGRNNGNVSPDGNGEFSENDTKRMRRPNRAKTFKVEISFASKIPLQAIANALRGQDSDNYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVTPGPVVDFLISNQNVQRPSDLDWVRAKRTLKNLRIKASPSNQEYKITGLSEFSCQKQKFTLKKKGGVDGDDTEEVTVYDYFVNHRNINLRYSGDLPCINVGKPKRPTYLPLELCSLVSLQRYTKALSTLQRSSLVEKSRQKPPERMRVLTDALSRSNYGSEPMLRNCGISINPSFTDVEGRVLQAPRLKFGNGEDFNPRNGRWNFNQKKLVKPTKIEKWAVVNFSARCDVRGLVRDLLKCGQMKGIEIEPPFDVFEEDGRNRRSPPLVRVEKMLEFVQSKLPGAPQFLLCLLPERKNSDLYGPWKKRNLADFGVVTQCIAPQRVNDQYLTNVLLKINAKLGGLNSMLGAEHSPSIPIVSRAPTIIIGMDVSHGSPGQTDIPSIAAVVSSREWPLISKYRACVRTQSPKVEMIDNLFKKVSDGVDEGIIRELLLDFYRSSGNRKPDNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQADSPDNVPPGTVIDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFKADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEERSETASSHSGAHPVPQLPKLNDNVSSSMFFC* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2137 904 MobiDBLite consensus disorder prediction 147 167 - -
Pvu8g2137 904 Pfam N-terminal domain of argonaute 54 215 IPR032474 -
Pvu8g2137 904 Pfam Piwi domain 563 870 IPR003165 GO:0003676
Pvu8g2137 904 SUPERFAMILY PAZ domain 272 433 IPR036085 GO:0005515
Pvu8g2137 904 SMART DUF1785_2 225 277 IPR014811 -
Pvu8g2137 904 Pfam Mid domain of argonaute 472 525 IPR032473 -
Pvu8g2137 904 Gene3D - 457 623 - -
Pvu8g2137 904 SMART Piwi_a_2 562 870 IPR003165 GO:0003676
Pvu8g2137 904 CDD PAZ_argonaute_like 277 392 - -
Pvu8g2137 904 CDD Piwi_ago-like 437 864 IPR045246 -
Pvu8g2137 904 Pfam PAZ domain 281 409 IPR003100 GO:0005515
Pvu8g2137 904 ProSiteProfiles PAZ domain profile. 294 393 IPR003100 GO:0005515
Pvu8g2137 904 MobiDBLite consensus disorder prediction 1 24 - -
Pvu8g2137 904 Pfam Argonaute linker 1 domain 227 274 IPR014811 -
Pvu8g2137 904 SUPERFAMILY Ribonuclease H-like 546 868 IPR012337 -
Pvu8g2137 904 Gene3D - 629 904 IPR036397 GO:0003676
Pvu8g2137 904 Pfam Argonaute linker 2 domain 419 465 IPR032472 -
Pvu8g2137 904 Gene3D paz domain 271 397 - -
Pvu8g2137 904 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 3 903 - -
Pvu8g2137 904 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 3 903 - -
Pvu8g2137 904 ProSiteProfiles Piwi domain profile. 562 870 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2137 Pvu-Chr8 51777872 51784616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2137 45 904 Eukaryotic Initiation Factors Gene Family AT5G43810 35.730 1.66e-165 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2137 K11593 - gmx:100779439 1593.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2137 8 51777872 51784616 Pvu8g2137 8 51777872 51784616 ECH
Pvu6g0219 6 9945414 9954415 Pvu8g2137 8 51777872 51784616 PCT