Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2128 ATGAGCAAACAAGTTATGTTTACATCGGTTCAACGATTAACATATTTCCTCTCATTGACTACGCTGTTTCCTCAGGTACCCTTTGCTTCCACTTCTTTATCTAAGCCCATACAGTGCACATTTTCTTCTTACTTCTTCTTGCCCCCCACCCAACTTGGAGATCTTTTCATTCACACCCTGTTCACCTTTGGTGTTGTTGTTCTCTCCTCAGAAACAAAAGGAACAAAAACTTTCAACATGGGAAACTGCTGCAGAAAACCAGTGGCTCATGTGTCTTCCACGAGTTTCTTTGGAAGCTCAAAGTCTCGAAGTAAGACAAAACAGAACTCAAATTCTACTAAAGGAAAAGCTCCTTTAAGAGCTTCAGCATCAAATGTTGACAAACCCATCTCCAACAACCTTAAGTCCTTCACCTTCAATGAACTAAAAGAGGCGACTAAGAACTTCAGGCAAGAAAACTTAATTGGAGAAGGAGGGTTTGGGTTTGTGTACAAGGGATGGATAGATAAGAACACTTATGCTCCCACAAGACCAGGGACTGGAATTGTAGTGGCAATCAAGAAACTTAAACCAGAAAGTTTTCAAGGTCACAGAGAATGGTTGGCAGAAGTCAATTATCTAAGCCAGCTTCACCATGAAAATCTGGTGAAACTTATTGGTTACTGCTCAGATGGTAAAAACAGGCTTCTAGTTTATGAGTTTATGCATAAAGGAAGTTTGGAAAATCATTTATTCAGAAAAGGTGTTCAGCCTATTCCCTGGACTATCCGGATAAACATTGCAGTTGCTGTTGCAAGAGGATTAACATTTTTACATACCCTAGATGCAAATGTTATTTATCGTGATTTAAAGGCAGCCAACATCCTACTTGATTCGGATTTCAACCCAAAGCTTTCGGATTTTGGCTTGGCAAGAGATGGTCCTACAGGAGACAACACCCATGTTTCTACCAGAGTTATTGGATCTCATGGTTATGCTGCACCAGAGTATGTAGCTACAGGTCATTTGACCCCAAGCAGTGATGTATACAGCTTTGGAGTTGTGTTGTTAGAGTTACTAACAGGAAGGCGTGTAGTTGAAGATGAGAGAAGTGGATTTTCAGAAGAAACACTGGTGGATTGGGCAAGGCCATTCCTGAGTGATATCAGAAGAATTTTGAGAATCATGGACACAAGGTTAGGTGGTCAATACTCCAAGAAAGGAGCACAAGCAGCAGCAACACTTGCACTGCAATGTCTAAATACAGATCCCAAATGCAGACCAACTATGGTAAATGTTCTAGCTGCATTGGAAGCACTAAATTCCTCAAATTCATTCCCAAGGACCCCAAAATCTGGAACAGAGAATCATACACCAAAGCATTCTAGTCATTCCCAAAAATCAGCTACAAATAATAACAGACTATGA 1407 0.4058 MSKQVMFTSVQRLTYFLSLTTLFPQVPFASTSLSKPIQCTFSSYFFLPPTQLGDLFIHTLFTFGVVVLSSETKGTKTFNMGNCCRKPVAHVSSTSFFGSSKSRSKTKQNSNSTKGKAPLRASASNVDKPISNNLKSFTFNELKEATKNFRQENLIGEGGFGFVYKGWIDKNTYAPTRPGTGIVVAIKKLKPESFQGHREWLAEVNYLSQLHHENLVKLIGYCSDGKNRLLVYEFMHKGSLENHLFRKGVQPIPWTIRINIAVAVARGLTFLHTLDANVIYRDLKAANILLDSDFNPKLSDFGLARDGPTGDNTHVSTRVIGSHGYAAPEYVATGHLTPSSDVYSFGVVLLELLTGRRVVEDERSGFSEETLVDWARPFLSDIRRILRIMDTRLGGQYSKKGAQAAATLALQCLNTDPKCRPTMVNVLAALEALNSSNSFPRTPKSGTENHTPKHSSHSQKSATNNNRL* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2128 468 SMART serkin_6 149 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2128 468 Gene3D Phosphorylase Kinase; domain 1 123 234 - -
Pvu8g2128 468 PANTHER OS01G0588500 PROTEIN-RELATED 95 457 - -
Pvu8g2128 468 MobiDBLite consensus disorder prediction 437 468 - -
Pvu8g2128 468 CDD STKc_IRAK 155 433 - -
Pvu8g2128 468 ProSiteProfiles Protein kinase domain profile. 149 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2128 468 PANTHER TYROSINE KINASE FAMILY PROTEIN 95 457 - -
Pvu8g2128 468 ProSitePatterns Protein kinases ATP-binding region signature. 155 188 IPR017441 GO:0005524
Pvu8g2128 468 Pfam Protein kinase domain 150 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2128 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Pvu8g2128 468 MobiDBLite consensus disorder prediction 94 122 - -
Pvu8g2128 468 SUPERFAMILY Protein kinase-like (PK-like) 123 430 IPR011009 -
Pvu8g2128 468 Gene3D Transferase(Phosphotransferase) domain 1 235 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2128 Pvu-Chr8 51634071 51637739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2128 106 436 Glycoside Hydrolase AT3G07070 49.706 3.43e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu8g2128 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2128 - - pvu:PHAVU_008G205600g 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0214 6 9829717 9832983 Pvu8g2128 8 51634071 51637739 PCT