Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2120 ATGGCTGTCACCTTCTCAGATCTACACACCGAAGAGGGTATCAAATCCCTCGATCAATTCCTTTCTGGGAAAACCTATATTTCTGGGGATCTATTTACAAAGGATGATATCAAGGTGTATGCAGCTGTTGTGGAAAAGCCTGGGGACTCTTTCCCCAATGCTTCCAAGTGGTACGATGTTGTCTCTTCTCATGTTGCCTCAAGCTTCCCTGGGAAGGCTGAAGGGGTTAGATTCAGTGCCGTAGCTGCTCCAGCTGCACCTGCCAAAGCGGCTGCTACTGCTGAAGAAGATGATGATGATCTAGATCTCTTTGGTGATGAGACAGAGGAGGATAAGAAGGTAGCAGAGGAAAGGGAGGCTGCTAAAAAGTCTACCAAGAAAAAAGAGAGTGGCAAGTCTTCTGTCCTACTCGATGTTAAGCCTTGGGATGATGAGACCGACATGAAGAAGCTGGAAGAGGCTGTCCGCAGTATTGAGATGCCTGGTTTATTGTGGGGAGCATCCAAACTGGTGCCAGTGGGATATGGAATCAAGAAGTTGCAGATCATGATGACAATTGTGGATGACCTTGTTTCTGTGGACACCCTTGTCGAGGAACAACTGACAGTTGAGCCACGCAACGAGTATATCCAAAGTTGTGACATTGTTGCATTCAACAAAATTTAA 666 0.464 MAVTFSDLHTEEGIKSLDQFLSGKTYISGDLFTKDDIKVYAAVVEKPGDSFPNASKWYDVVSSHVASSFPGKAEGVRFSAVAAPAAPAKAAATAEEDDDDLDLFGDETEEDKKVAEEREAAKKSTKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDTLVEEQLTVEPRNEYIQSCDIVAFNKI* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2120 221 CDD EF1B 130 221 IPR014038 GO:0003746|GO:0006414
Pvu8g2120 221 Gene3D - 125 221 IPR014717 -
Pvu8g2120 221 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 221 - -
Pvu8g2120 221 Pfam EF-1 guanine nucleotide exchange domain 134 221 IPR014038 GO:0003746|GO:0006414
Pvu8g2120 221 PANTHER ELONGATION FACTOR 1-BETA 2 1 221 - -
Pvu8g2120 221 SUPERFAMILY eEF-1beta-like 129 221 IPR036219 -
Pvu8g2120 221 SUPERFAMILY GST C-terminal domain-like 10 65 IPR036282 -
Pvu8g2120 221 SMART EF1_GNE_2 132 221 IPR014038 GO:0003746|GO:0006414
Pvu8g2120 221 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 97 105 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pvu8g2120 221 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 210 221 IPR001326 GO:0003746|GO:0005853|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2120 Pvu-Chr8 51569717 51572840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2120 1 221 Eukaryotic Initiation Factors Gene Family AT5G12110 73.684 3.60e-108 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2120 K03232 - gmx:100816855 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0205 6 9489247 9491279 Pvu8g2120 8 51569717 51572840 PCT