Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2105 ATGGCTTCCATAGCGGAACAACCCATCAATGGTGAGGTTCGCGAGAACAAGCAGAAGAATATGGGTGGTGAAGGAAGAAACAGAAGGGTTCTTCAGGATATTGGGAATCTTGTGGCCAAACAAGGCCATGGTGGTATTAATGTGTCTAAACCTGTTACAAGGAACTTTCGTTCTCAATTGTTGGCCAACGCACAAGAGAAGAACAAGAAGTCAAGCACTGAAGTGGAGAATGCTGCGGTGGTAGTAAAGGCGAAGGCAGCTCAGAAGCCTAAAGAGGAACCTGAAGTGATAGTGATTAGCGATGATGATGAATCGGAGGAACAGGATAAGCAATATGTTGTTAAGGGAAACAAGACAAGGGACAAAGATGCCAAGGCTTTTAGTTCAGTCCTCTCTGCTCGAAGCAAGGCTGCTTGTGGACTTCCAAGGGAATTGGTAGTGAACATTGATGCAACTGACACGGACAATGAATTGGCAGCAGCGGAGTATATTGATGATATCTATGAATTTTACAAAAATACTGAGAAAGATGGCTGTGTGCATGACTATATGGATTCACAACCAGATATTAACGCCAAGATGAGATCAATCCTTGTGGACTGGTTGATAGAAGTGCATAGAAAATTTGAGCTCATGCCAGAAACTCTCTATTTGACCCTGAACATCATTGATCGGTTCATGTCTGTGAAGGCCGTGGCTAGAAGGGAACTTCAGCTTGTTGGCATCAGCTCTATGCTGCTGGCCTCAAAATATGAGGAGTTATGGGCACCAGAGGTTAATGACTTTGTGTGCATATCAGACAATGCTTATGTAAGTGAACAAGTGCTGTTGATGGAGAAAACAATCCTTAGGAAGCTTGAGTGGTACTTAACAGTTCCCACACCCTATGTCTTCTTGGTTAGGTACATCAAAGCCTCCACTCCATCTGATAAAGAGATGGAATGTATGGTGTTTTTCCTTGCTGAACTTGGTATGATGCACTATCCTACGGTAGTCTCGCACTGCCCTTCTTTGATTGCTGCTTCTGCTGTACTTGTGGCTCGATACACTCTTCAAAGGACTCCTTTCTGGACAAGCACCTTGAAGCACTACACAGGCTACTCTGAGGAGCAACTAAGGGATTGCGCCAAAAACCTAGTCAACCTGCATGCCACTGCTCCAGAAAGTAAGCTTAGGGCAGTTTACAAGAAATTCAGTAGCTCAGATTGCTGCTCTGTTGCCCTTCGTTCTCCAGCAAAGCACTTGACAACACTGTCTTAA 1260 0.4444 MASIAEQPINGEVRENKQKNMGGEGRNRRVLQDIGNLVAKQGHGGINVSKPVTRNFRSQLLANAQEKNKKSSTEVENAAVVVKAKAAQKPKEEPEVIVISDDDESEEQDKQYVVKGNKTRDKDAKAFSSVLSARSKAACGLPRELVVNIDATDTDNELAAAEYIDDIYEFYKNTEKDGCVHDYMDSQPDINAKMRSILVDWLIEVHRKFELMPETLYLTLNIIDRFMSVKAVARRELQLVGISSMLLASKYEELWAPEVNDFVCISDNAYVSEQVLLMEKTILRKLEWYLTVPTPYVFLVRYIKASTPSDKEMECMVFFLAELGMMHYPTVVSHCPSLIAASAVLVARYTLQRTPFWTSTLKHYTGYSEEQLRDCAKNLVNLHATAPESKLRAVYKKFSSSDCCSVALRSPAKHLTTLS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2105 419 Gene3D - 166 407 - -
Pvu8g2105 419 SUPERFAMILY Cyclin-like 292 414 IPR036915 -
Pvu8g2105 419 PIRSF Cyclin_A_B_D_E 2 419 IPR039361 -
Pvu8g2105 419 PANTHER CYCLINS 20 414 IPR039361 -
Pvu8g2105 419 CDD CYCLIN 291 380 IPR013763 -
Pvu8g2105 419 Pfam Cyclin, C-terminal domain 293 408 IPR004367 -
Pvu8g2105 419 MobiDBLite consensus disorder prediction 1 28 - -
Pvu8g2105 419 Pfam Cyclin, N-terminal domain 166 290 IPR006671 -
Pvu8g2105 419 SMART cyclin_7 297 381 IPR013763 -
Pvu8g2105 419 SMART cyclin_7 200 284 IPR013763 -
Pvu8g2105 419 Gene3D - 180 291 - -
Pvu8g2105 419 SUPERFAMILY Cyclin-like 155 290 IPR036915 -
Pvu8g2105 419 SMART Cyclin_C_2 293 412 IPR004367 -
Pvu8g2105 419 ProSitePatterns Cyclins signature. 195 226 IPR006671 -
Pvu8g2105 419 CDD CYCLIN 194 283 IPR013763 -
Pvu8g2105 419 PANTHER CYCLIN-B1-4 20 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2105 Pvu-Chr8 51388409 51391075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2105 6 408 Core Cell Cycle Gene Families AT2G26760 52.709 1.89e-144 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2105 K21777 - gmx:547782 635.565