Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2091 ATGGGCAACTGTTGCTCAGGTGGCACCAATGATTGTGACAACAAGGGAGAAACCAACCAAAACAACAACAATGATGAAGGGGGAACTGCAACCACCCCACCACAATCTAAGCCTAACCATCCTCCATCCAAGCAATCCAAGCCGGCCGCCATCGGCCCTGTGCTTGGAAAGCCAATGGAGGATGTGAGAAGTACTTACAGCATGGGGAAAGAGCTAGGGAGAGGCCAGTTTGGTGTCACACATCTGTGCACACACAAGAGCACAGGAAAGCAATATGCATGCAAAACCATTGCCAAGAGAAAGCTGGTTAACAAGGAGGACATAGAGGATGTGAAGAGGGAGGTGCAAATCATGCACCATCTCTCAGGGCAGCCCAACATTGTGGAGCTTGTCAATGTGTTTGAGGATAAACAATCTGTCCATTTGGTGATGGAGTTGTGTGCTGGGGGTGAGCTCTTTGATCGCATCATTGCCAAGGGACATTACACTGAACGTGCAGCAGCTTCCCTGTTGAGAACCATAGTGCAGATCGTCCACACGTGCCATTCCATGGGGGTCATTCATAGAGATCTTAAGCCTGAGAATTTCCTTCTCTTGAACAAGGATGAAAATGCACCTCTCAAGGCCACCGATTTCGGTCTCTCAGTTTTTTACAAGCAAGGAGAGATGTTTAAGGACCTTGTTGGAAGCGCATATTACATTGCACCTGAGGTCTTGAAGAGGAAATATGGTCCAGAAGTTGACATTTGGAGTATTGGTGTCATGCTATACATTCTTCTATCTGGTGTTCCTCCATTTTGGGCAGAAACCGAAAATGGAATATTCCATGCAATCCTACGAGCTCATATTGACTTCACAAGTGATCCATGGCCATCAATTTCGCCGGCAGCAAAAGATCTCGTCAGGAAAATGTTGAATGCGGATCCCAGACAGAGGCTGACAGCGTACGAGGTTTTGAATCACCCATGGATCAAGGAGGATGGAGAAGCACCAGATACACCACTTGACAACGCAGTACTGAATAGGCTCAAGCAGTTCAGAGCAATGAACGAATTCAAGAAAGTTGCTCTAAGGGTCATCGCGGGCTGCCTATCAGAGGAAGAAATCATGGGGTTGAAGCAGATGTTCAAGGGGATGGACACTGACAACAGCGGCACCATTACAATTGAAGAGCTCAAACAAGGGCTTGCAAAACAAGGGACCAAGCTAACAGAACAGGAAGTGAAGCAATTAATGGAAGCTGCAGATGCCGATGGCAATGGAACCATTGATTACGATGAATTCATCACAGCAACAATGCACATGAACCGAATGAACAAAGAAGATCATCTTTATACTGCTTTCCAATACTTCGACAAAGATAACAGCGGGTACATTACCATCGAAGAACTAGAACAGGCTCTCCATGAGTTTAACATGCACGATGGTAGGGACATCAAGGATATCATTTCAGAAGTTGATGCAGATAATGATGGCCGGATTAACTATGATGAATTTGCTGCAATGATGAACAAAGGAAACCTAGAAGTTAACACCAAGAAGAGGCGTGATTCAACCTTATATTAG 1566 0.4566 MGNCCSGGTNDCDNKGETNQNNNNDEGGTATTPPQSKPNHPPSKQSKPAAIGPVLGKPMEDVRSTYSMGKELGRGQFGVTHLCTHKSTGKQYACKTIAKRKLVNKEDIEDVKREVQIMHHLSGQPNIVELVNVFEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGEMFKDLVGSAYYIAPEVLKRKYGPEVDIWSIGVMLYILLSGVPPFWAETENGIFHAILRAHIDFTSDPWPSISPAAKDLVRKMLNADPRQRLTAYEVLNHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNEFKKVALRVIAGCLSEEEIMGLKQMFKGMDTDNSGTITIEELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNKEDHLYTAFQYFDKDNSGYITIEELEQALHEFNMHDGRDIKDIISEVDADNDGRINYDEFAAMMNKGNLEVNTKKRRDSTLY* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2091 521 MobiDBLite consensus disorder prediction 1 57 - -
Pvu8g2091 521 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 13 512 - -
Pvu8g2091 521 Pfam Protein kinase domain 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2091 521 ProSiteProfiles EF-hand calcium-binding domain profile. 478 509 IPR002048 GO:0005509
Pvu8g2091 521 ProSiteProfiles EF-hand calcium-binding domain profile. 403 438 IPR002048 GO:0005509
Pvu8g2091 521 Gene3D Phosphorylase Kinase; domain 1 68 151 - -
Pvu8g2091 521 ProSitePatterns EF-hand calcium-binding domain. 380 392 IPR018247 -
Pvu8g2091 521 SMART serkin_6 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2091 521 ProSiteProfiles Protein kinase domain profile. 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2091 521 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Pvu8g2091 521 SMART efh_1 371 399 IPR002048 GO:0005509
Pvu8g2091 521 SMART efh_1 407 435 IPR002048 GO:0005509
Pvu8g2091 521 SMART efh_1 443 471 IPR002048 GO:0005509
Pvu8g2091 521 SMART efh_1 478 506 IPR002048 GO:0005509
Pvu8g2091 521 SUPERFAMILY EF-hand 364 511 IPR011992 -
Pvu8g2091 521 Pfam EF-hand domain pair 372 432 IPR002048 GO:0005509
Pvu8g2091 521 Pfam EF-hand domain pair 442 503 IPR002048 GO:0005509
Pvu8g2091 521 ProSitePatterns EF-hand calcium-binding domain. 452 464 IPR018247 -
Pvu8g2091 521 ProSitePatterns Protein kinases ATP-binding region signature. 72 99 IPR017441 GO:0005524
Pvu8g2091 521 Gene3D - 332 508 - -
Pvu8g2091 521 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 512 - -
Pvu8g2091 521 CDD STKc_CAMK 66 323 - -
Pvu8g2091 521 ProSiteProfiles EF-hand calcium-binding domain profile. 439 474 IPR002048 GO:0005509
Pvu8g2091 521 ProSiteProfiles EF-hand calcium-binding domain profile. 367 402 IPR002048 GO:0005509
Pvu8g2091 521 Gene3D Transferase(Phosphotransferase) domain 1 152 331 - -
Pvu8g2091 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Pvu8g2091 521 SUPERFAMILY Protein kinase-like (PK-like) 63 325 IPR011009 -
Pvu8g2091 521 ProSitePatterns EF-hand calcium-binding domain. 416 428 IPR018247 -
Pvu8g2091 521 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2091 Pvu-Chr8 51206612 51209875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2091 1 520 EF-hand Containing Proteins AT5G12180 79.395 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu8g2091 Pkinase 3.9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2091 K13412 - gmx:100820422 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0159 6 7353127 7356985 Pvu8g2091 8 51206612 51209875 PCT