Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2081 ATGGGAAACAATGTTGGTGATGAATCCTTGGGTTTTCCACCATCCCCAAAGCCATCACCTACCATTGGTGAGAGAAATCCTTCTTCCAAAGAACCAAAACCTACCATGGTTGAAACTGGTAAAAGTTCTGAGGAGAATGAACCTAATCCAACCATCAGTGATGAGTTAGAAGAAGGTGGGGAGTTTCCAAAACCCATAATCATGATTGTTCCTGCTGGCGAGGACATTGTCAAGACCATTCTTGACTATGCTCGTGACAGAGATGTGAGCATCTTGGTGCTTCATGCTTCAGGTCCCATATCTGAAGTTCACATAACTAACCCTTTGCCTCCTTTCCATGATTGTACTTTTCATGGAAACTTGTACATGTTTTTTCTGACTGGTGTTTACACCAAATGCCTTTCACCCTTCCCACCCAAGAGCATTCCCTTTTCCTACTTCAACATTCAATTCTCCAAGGATGATGCTCCTGAAGTCTATGGAGGCCTTGTTGGAAACACTCTCATTGCTGCACAACCTCTGCAAGTCACAGCTTCTCTCTTTAAGGACCATGAGTACTATGAGTCTCCTATCACTGCTACAAATCGTCACTCTTCCATTCTGAGTATTCCTAATGTCACCGCTGTCGCCGCCGCTGTCGCCACCACCAACAACACAGTCCATCACCATGATTTCTTCGGTGGAGGTTCAACCCCATCTCCTCCTATAGATTTCACCAAGGTTTATCGAAACAACCCAACCAATCCAGGAGATAATCGCTAG 762 0.4488 MGNNVGDESLGFPPSPKPSPTIGERNPSSKEPKPTMVETGKSSEENEPNPTISDELEEGGEFPKPIIMIVPAGEDIVKTILDYARDRDVSILVLHASGPISEVHITNPLPPFHDCTFHGNLYMFFLTGVYTKCLSPFPPKSIPFSYFNIQFSKDDAPEVYGGLVGNTLIAAQPLQVTASLFKDHEYYESPITATNRHSSILSIPNVTAVAAAVATTNNTVHHHDFFGGGSTPSPPIDFTKVYRNNPTNPGDNR* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2081 253 Gene3D - 64 199 - -
Pvu8g2081 253 MobiDBLite consensus disorder prediction 237 253 - -
Pvu8g2081 253 MobiDBLite consensus disorder prediction 22 49 - -
Pvu8g2081 253 MobiDBLite consensus disorder prediction 225 253 - -
Pvu8g2081 253 MobiDBLite consensus disorder prediction 1 58 - -
Pvu8g2081 253 ProSiteProfiles PPC domain profile profile. 60 204 IPR005175 -
Pvu8g2081 253 Pfam Plants and Prokaryotes Conserved (PCC) domain 64 182 IPR005175 -
Pvu8g2081 253 SUPERFAMILY AF0104/ALDC/Ptd012-like 64 190 - -
Pvu8g2081 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 46 220 IPR014476 GO:0003680
Pvu8g2081 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 46 220 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2081 65 199 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 28.369 1.01e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2081 - - pvu:PHAVU_008G200900g 513.072