Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2033 ATGAAAAAGGCTGAAACACAGAAAAAAATGAAAAATTGTGAGAGAAGTGTGAGGCAGTACAACAAATCTGAACTTCCACGCCTTCGTTGGACACCTCAACTCCATCAACACTTTGTTCAAGCTATTCAAAGTATAGGTGGAAAACACAAGGCAACTCCAAAGAGAATTCTGCAGCAGATGCGTGTGAGAGGACTGAGTATCGCTCACATCAAAAGCCATCTTCAGATGTACAGAAACATGAAAGACTATGCCAAGAATTCTGCAGATGAGTTGGTGGAAGGAAATGCAAACGATTTCAAACTATGCTCCATTTCTCCAACCCAAAGGATAATTCTGAAGGGGGAACTTCATCTCTTAGACAACAAAAAAGGGCTTTTACAAAGCACTGAAGAAACTGATTATGATCTAAACCAGGAAGGGCAGTCAAGTGAAGAAGAAAATGTTCCTAATCTATTATTCTCCTTTAGCAGACCTCTAATTTCCATGATGCAAAGTGATGAGAATAGCAAAGACATGATGCAATTTCCCTCATCAACTGCAGCTGCTGCTAATCATTCTATTACCTTTGGAAACAGTTATATTAACTTAGACCTAACAATCTGA 603 0.3897 MKKAETQKKMKNCERSVRQYNKSELPRLRWTPQLHQHFVQAIQSIGGKHKATPKRILQQMRVRGLSIAHIKSHLQMYRNMKDYAKNSADELVEGNANDFKLCSISPTQRIILKGELHLLDNKKGLLQSTEETDYDLNQEGQSSEEENVPNLLFSFSRPLISMMQSDENSKDMMQFPSSTAAAANHSITFGNSYINLDLTI* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2033 200 Coils Coil 3 23 - -
Pvu8g2033 200 Gene3D - 25 82 - -
Pvu8g2033 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 82 IPR017930 -
Pvu8g2033 200 SUPERFAMILY Homeodomain-like 26 80 IPR009057 -
Pvu8g2033 200 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 9 151 - -
Pvu8g2033 200 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 26 80 IPR006447 GO:0003677
Pvu8g2033 200 Pfam Myb-like DNA-binding domain 28 78 IPR001005 -
Pvu8g2033 200 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 151 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2033 Pvu-Chr8 50393457 50396966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2033 17 81 G2-like Transcription Factor Family AT2G42660 63.077 3.36e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu8g2033 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2033 - - pvu:PHAVU_008G196200g 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0265 6 11402652 11408495 Pvu8g2033 8 50393457 50396966 PCT