Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2022 ATGGGAGAACATGGTGAGGAAGAAGAGCGTCTTGGTTTCACCTATGATGTGTTCATCAGTTTTAGAGGAGAAGATACAAGGAACAATTTTATAGGGCATCTGCGTAGAGAGTTAGATGGGAAGGGAATAAAAAGTTTCAATGATGATAAGAATATGAGGACAGGGGAAAGTCTTCCACCTGATCTGTCGAAGGCCATTGAAGAATCTAAGATTTTCATCGTTGTGTTTTCTGAGAACTATGCATCTTCCACACGGTGTCTGGATGAACTTGTTAAGATCATAGAACGCAGCAAGATGAAGGAGAAGAAGCAGCTTGTTTACCCAGTGTTTTACCATGTAGATCCCTCAGATATACGGCACGAAAGAAATAGCTTCGGAAAACACATGAAGGCACATGAATCACAGAGAATTCAGGATTGGAGGTCAGCCTTGTCTCAAGCAGTTGACTTCCCAGGGAAGCATATTGCCACCGGGGATGATGAAAGCTATCGTATTGAAGAAATTGTTGGAAAGGTCCATGAATATATAACTCCTAAACCTTTATATAGTGGTCAAAACCCTGTTGGACTTGAGGCTTGCATAGAAGAAGTTAAGTCACTTTTGGACAAGAAGGCTGAAGATAAAACTGTAAGAATGTTGGGCATATATGGACTTGGTGGAATTGGAAAAACGGAACTTGCCAAAGCTTTGTATAACAAAATTGTGCAAAACTTTGATGCTGCAAGTTTTCTTTCCGATGTTAGAGAAAAATCAAACAGAATCAATGGCATGGAAGATCTACAAAAGACACTTTTATCTGATATGTTTGAGGAGTTGGAAACTAAATTGGGAAGTACAATTAAAGGAATGGGTGAAATAAAAGAAAAGCTTCAGAAAAAGAAAGTTCTTTTGGTTCTTGATGACGTTGGTGATAAAGACCAGTTAGAAAAGTTGGCAGGAGAGTGCAATTGGTTTGGTCCAGGTAGTAGGATCATTATAACGACAAGGGAAGAAAATGTGCTAATTGCTCACCAAGTTAAACTTAAGTATGAAATGAAGGAACTTGATGACCAACATTCTTTAGAGCTATTTTGTTGGAATGCCTTCAAACAAAGTTATCCTAAAACAGGTTTTGAAGATGTGTCTGTGCGTGCTGTAGATTACGCCAAAGGTCTTCCACTGGCTTTAAAAGTCATAGGCTCTGATTTAGCTGCTTTTCATGAAAGTTTAGGAGATTGGGAAATGGCAATGAAAGAATATGAGAAGACTCCAAATACAGAGATTCAAGATGTGCTTAAAATAAGCTACGATAGATTGGATGATAATGCCAAACAAATTTTCTTGGACATAGCTTGCTTCTTTAAAGGGGAGAGAATGGAATATGTGAAAAAGATACTTCTAGAATTTTGTCCAACAACCAACATGAAAGTACTTCTTAATAAATCTCTCATAACTATCGAGTATGACTGTCTGAAGATGCATGATCTAATACAAGATATGGGTAGAGAGATTGTTAAGAAGGAATCAATAAATCCTGCTAAACGTAGCAGAATATGGTATTATGAAGATGCTATTGAAATACTAACCAAAGATTATGGAAGCGATAAGATTCAAGGGATTATGCTTGATCCCCCTCAACGAGAAGAAGTAGAATGGAGTGGTACTGCGTTGGTGAAGATGGAATGTCTCAGAATTCTCATTGTTCGAAACACATCATTTTCATCTGAACTTGAACATTTACCAAATTATTTAAGACTTCTTGACTGGGAAGAGTGTCCTTCAAAGTCTTTCCCACCAAAATTTAATCCAGAGAACATCATTGTTTTAAATTTGCCTAGAAGTCGTCTAACATTGGAAGAGCCATTTAAGAAATTTCCATGCTTGACTATTATGGACTTTTCATATAACCAAAGTATCAAAACAATACCTGATATGTCTGAACTTCAGATTCTAAGAGAACTGAGACTTGATCATTGTAGAGAGCTAACTGCAGTACATGAATCTGTTGGTGAGCTGAAAAGGCTTGCTCATTTAAGTGTTTCAGGATGCATAAAACTCGAAAAATTCGTGTCTAAAATGTTTCTGCCGTCTTTAGAAGTCTTTGACCTTAATTTATGTGAAAGCCTTGGTCACTTCCCGGAGATAAGGCTAGAAATGACAAAGCCATTGAAGATTTATATGATAAATACTGCTATTCAAGAGCTTCCAGAATCCATTGGTAAACTTACTGGGCTTGAATGTATAGACATATCAAATAACAGGGAACTTAAATGTCTACCAAGCAGCTTATTCAAGTTGCCAAATGTTGTTTCCCTCAAAATCGAAGCATGCTCCAAACTTCAAGAATCCTTCAGAAGTTTGGTGCAGCACCCTTCAAAAGCCGATGTTCGTCCAAAATTACAATCACTGAATGTCGAAAATGATAACTTGTCTGATGAAGATCTTCTTGCTATTCTTTGCTACTTTCCAAATTTGAAAGAATTGATTGCTTCAGAGAACAATTTTGTTTCTATCCCTTCATGCATCAAGGAATGTGGTGACTTGACAAGTCTCGAACTGAATGGATGTGAGAAGCTTAAAAAAATTCCTGAATTCACTAACTTGAGAATTCTTTATGTTCATCATTGTTCAAACCTTGAAGAAATTTCAGAGTTGTCGTCAACTGTTCAGAAAGTAGACGCAAGATTTTGTTTCAAGTTAACTAGAGAGACATCAGACATGTTATGGAATCAGGTGAAGAAGAAAGGGGTACGTGGAATAGAACTGGTGATGCCATTTACAACTGAGATTCCAGAATGGTTTAACTATGTGGGGGTCCAAAGGTATCCTCGTTTCTGGGTTCGTAAGAAGTTCCCTAACATTGCTCTGGCCATGATCTTCCACTTCCAAGATGAGAGTGAAAGGGAAAAATTTGCTCGTCGTCGCGTTGTTGATCTGCGTTTACTTATCAACGGTCAATATGTTCCTTGCAAAGGGTCTCGCAAATTCAGAATTGAAGCAGAACACATCTTGATCTTTGATCTACGAGTTTTGTTCAGTGACAAGGAGTGGCTTGGCCTTGACCGACTTCTGATGAAGAAGGAGTGGAATCTGGTGCAGATTGCGTATAAAGCCACTTCCTCCTTCGTGATAAGTGGTTGGGGAGCTTTTGTGTATGAAGAAGACAAAACCAAAATGGATGATCTCGTATTCGCTTCTCCCGATCCCATGGATCCAGACGAGATGCCACAGGCAATAGTTCCTAAAAAAGATGATATGGAGGAATATAAAATGATGATAGAGAGTCTAGGTTTGGACGAATCATATAAGAGGACGTTGAATGAATGGCTGGACAACAAAGGAAGAGGGGGGTTTGAAGGAATGGCTGAAAACCATTCCATGCAAATTGTATTGGGAGAACTACAGAGAATATCCCAGGATGCTGAGAATGCATTAAAAGCAGTAGGGTCAGCTTTAAAAGATCCAAAATCCACTCTGAGGCAGATTCTAGATGTGCTAAAAAATGATGATGGAAAGCCTAAAGTTACTATATTAGGTGATCTAGCGTTGATAAGACTAAAGGATCCAGTGAAACTGCATAATGTAGAAGAAGCTTCAACCTCTGGCCATACGGGAAGTGAGGAGGAGGAAGGCTACGATCCTCGGGTGGAAGAAATAGTGAGAGAGATGTTTGTTGAAGGAATGGAGGATGGACTTCTTGAGGCACATATTAGATTTCCTTCACTTGATATTGTTGAAACCAGAAGAGCTGCTTTGGAGAAGGGTTATAGGGTTAGATGGAGACCTGAAGATGAAGTGCAAACATCGATTGAAACCAGGACATACATAAGTGGAATTTACAGTGGACTCTTAGAAGCAAAGCTGATGTTTCCTGATTTGGACATGTGGCCAACAATTAATACTGTGGCAAAAAGGAAAGGGATTACAGAAACTTTTGGATCACCCACTGAAGCAAAGCCGAGCTTTCCACATTTGGATTCACCTCCTCTGGTGGAAGAAATGGTGAGAGAGATATTTGATCAAGGAATGATGGATGGAGGAGCTCCAACCTCTAGCCATAAGGAAAGTGAGGAGGAGGAAGCAATAACGCGAGAATTATGGTATGAAGGAATGAAAGATGGAGTTTTTGAGGCACAAAATAGATTTCCTTCTCTAGATATTGCTGACACCATTAGCATTGCCTTGGCGAAGGGTTCTGGAATTGAATGGACACCTAAAGGGATGGAGATAATACCCTCAGCTGAAAATAGAACATACTTGAGTGGAGTTTACGGTGGACTCTTGGAAGCAAAGCTGAGGTTTCCTGATTTGGACGTGTTGGAAACACTAAATACTGTGGCAAATAGGAAAGGGATAAATACAAATTTTGTATCACCCTAG 4359 0.3907 MGEHGEEEERLGFTYDVFISFRGEDTRNNFIGHLRRELDGKGIKSFNDDKNMRTGESLPPDLSKAIEESKIFIVVFSENYASSTRCLDELVKIIERSKMKEKKQLVYPVFYHVDPSDIRHERNSFGKHMKAHESQRIQDWRSALSQAVDFPGKHIATGDDESYRIEEIVGKVHEYITPKPLYSGQNPVGLEACIEEVKSLLDKKAEDKTVRMLGIYGLGGIGKTELAKALYNKIVQNFDAASFLSDVREKSNRINGMEDLQKTLLSDMFEELETKLGSTIKGMGEIKEKLQKKKVLLVLDDVGDKDQLEKLAGECNWFGPGSRIIITTREENVLIAHQVKLKYEMKELDDQHSLELFCWNAFKQSYPKTGFEDVSVRAVDYAKGLPLALKVIGSDLAAFHESLGDWEMAMKEYEKTPNTEIQDVLKISYDRLDDNAKQIFLDIACFFKGERMEYVKKILLEFCPTTNMKVLLNKSLITIEYDCLKMHDLIQDMGREIVKKESINPAKRSRIWYYEDAIEILTKDYGSDKIQGIMLDPPQREEVEWSGTALVKMECLRILIVRNTSFSSELEHLPNYLRLLDWEECPSKSFPPKFNPENIIVLNLPRSRLTLEEPFKKFPCLTIMDFSYNQSIKTIPDMSELQILRELRLDHCRELTAVHESVGELKRLAHLSVSGCIKLEKFVSKMFLPSLEVFDLNLCESLGHFPEIRLEMTKPLKIYMINTAIQELPESIGKLTGLECIDISNNRELKCLPSSLFKLPNVVSLKIEACSKLQESFRSLVQHPSKADVRPKLQSLNVENDNLSDEDLLAILCYFPNLKELIASENNFVSIPSCIKECGDLTSLELNGCEKLKKIPEFTNLRILYVHHCSNLEEISELSSTVQKVDARFCFKLTRETSDMLWNQVKKKGVRGIELVMPFTTEIPEWFNYVGVQRYPRFWVRKKFPNIALAMIFHFQDESEREKFARRRVVDLRLLINGQYVPCKGSRKFRIEAEHILIFDLRVLFSDKEWLGLDRLLMKKEWNLVQIAYKATSSFVISGWGAFVYEEDKTKMDDLVFASPDPMDPDEMPQAIVPKKDDMEEYKMMIESLGLDESYKRTLNEWLDNKGRGGFEGMAENHSMQIVLGELQRISQDAENALKAVGSALKDPKSTLRQILDVLKNDDGKPKVTILGDLALIRLKDPVKLHNVEEASTSGHTGSEEEEGYDPRVEEIVREMFVEGMEDGLLEAHIRFPSLDIVETRRAALEKGYRVRWRPEDEVQTSIETRTYISGIYSGLLEAKLMFPDLDMWPTINTVAKRKGITETFGSPTEAKPSFPHLDSPPLVEEMVREIFDQGMMDGGAPTSSHKESEEEEAITRELWYEGMKDGVFEAQNRFPSLDIADTISIALAKGSGIEWTPKGMEIIPSAENRTYLSGVYGGLLEAKLRFPDLDVLETLNTVANRKGINTNFVSP* 1453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2022 1452 Gene3D - 179 342 IPR027417 -
Pvu8g2022 1452 Gene3D Ribonuclease Inhibitor 713 907 IPR032675 -
Pvu8g2022 1452 Gene3D Ribonuclease Inhibitor 543 712 IPR032675 -
Pvu8g2022 1452 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 149 IPR035897 -
Pvu8g2022 1452 SUPERFAMILY L domain-like 485 877 - -
Pvu8g2022 1452 Gene3D - 347 433 IPR042197 -
Pvu8g2022 1452 Gene3D - 13 178 IPR035897 -
Pvu8g2022 1452 Pfam NB-ARC domain 191 430 IPR002182 GO:0043531
Pvu8g2022 1452 SMART till_3 14 150 IPR000157 GO:0007165
Pvu8g2022 1452 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 1040 IPR044974 GO:0006952
Pvu8g2022 1452 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 1040 - -
Pvu8g2022 1452 PRINTS Disease resistance protein signature 212 227 - -
Pvu8g2022 1452 PRINTS Disease resistance protein signature 289 303 - -
Pvu8g2022 1452 PRINTS Disease resistance protein signature 382 396 - -
Pvu8g2022 1452 PRINTS Disease resistance protein signature 686 702 - -
Pvu8g2022 1452 ProSiteProfiles TIR domain profile. 13 176 IPR000157 GO:0007165
Pvu8g2022 1452 Pfam TIR domain 15 172 IPR000157 GO:0007165
Pvu8g2022 1452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 443 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2022 Pvu-Chr8 50230183 50238874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2022 15 774 WRKY Transcription Factor Family AT4G12020 32.487 2.90e-93 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2022 - - pvu:PHAVU_008G194700g 1779.22