Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2020 GATGATGAAAGCTATTGTATTGAAGAAATTGTTGGGAAGGTCAAGGAATATATAACTCCTAAACCTTTATATAGTGGTCAAAACCCTGTTGGCCTTGAGGCCTGCATAGAAGAAGTTATGTCACTTTTGGACATGAAGTCTGATGATAAAACTGTAAGAATGTTGGGCATATATGGACTTGGTGGAATTGGAAAAACGGAACTTGCCAAAGCTTTGTATAACAAAATTGTGCAACACTTTGATGCTGCAAGTTTTCTTTCCGATGTTAGAGAAAAATCAAACAGAATCAATGGCATGGAAGATCTACAAAAGACACTTTTATCTGAGATGTTGGAGGGGTTGGAAACTGAATTGGGAAGCACAAGTAAAGGAATGCGTGAAATAAAAGAAAAGCTTCAGAAAAAGAAAGTTCTTTTGGTTCTTGATGACGTTGGTGATAAAGATCAGTTAGAAAAGTTGGCAGGAGGGTGTAATTGGTTTGGTTCAGGTAGTAGGATCATTGTAACGACAAGGGAAAAAGATGTGTTAATTGCTCACCAAGTTGGAAATATTTATGAAATGAAAGAACTTGATGACCAACATTCTTTAGAGCTATTTTGTTGGAATGCCTTCAGACAAAGTTATCCTAAAACAGGTTTTGAAGATGTGTCTGTGCGTGCTGTAGATTACGCCAAAGGTCTTCCACTGGCTTTAAAAGTCATAGGCTCTGATTTAGCTGCTTTTCATGAAAGTTTAGAAGATTGGGAAATGGCAATGAAAGAATATGAGAAGACTCCAAATAGAAAGATTCAAGATGTGCTTAAAATAAGCTACGATAGATTGGATGATAATGCCAAACAAATTTTCTTGGACATAGCTTGCTTCTTTAAAGGGGAGAGAACGGAATATGTGAAAATGATCCTTGAGGAATTTCGTTCAACAACCAACATGAAAGTACTTCTTAATAAGTCTCTCATAACTATCGAGTATGACTGCCTGAAGATGCATGATCTAATACAAGATATGGGAAGAGAGATTGTTAAGCAGGAATCAACAAATCCTGGTGAACGTAGCAGAATATGGTATTATGAAGATGTTACTGAAATTCTAACAGAAGATTATGGAAGTGATAAGATTCAAGGGATTATGCTTGATCCTCCTCAGCGAGAAGAAGTAAATTGGAGTGGAATTGAGTTTGAAAAGATGAAATGGCTCAGAATTCTCATTGTTCGAAACACATCATTTTCATCTGAACTTGAACATTTACCAAATCATTTAAGACTGCTTGACTGGGAAGAGTATCCTTCAAAGTCTTTCCCACCAAAATTTCATCCGAAGAAAATTGTTGTTTTCAATTTGCCTCGAAGTCGTCTAACATTGGAAGAGCCATTTAAGAAATTTCCATGCTTGACTATTATGGACTTTTCATATAACCAAAGTATCAAAGAAATACCTGATGTGTCTGAACTTCAGAATCTAAGAGAACTGAGACTTGATCATTGTAGAGAGCTAACTGCAGTACATGGATCTGTTGGTTTCCTGAAAAGTCTTGCTCATTTAAGTGTTTCAGATTGCACAAAACTCAAAAATTTCATGTCTGAAATGTTTCTACCGTCTTTAGAATTCTTTGACCTTAATTTATGTGAAAGCCTTGGTCACTTCCCAGAGATAAGGCAAGAAATGACAAAGCCATTGAAGATTTATATGATAAATACTGCTATTCAAGAGCTTCCAGAATCCATTGGTAAGCTTACTGGGCTTGTTTGTATAGACATATCAAATAACAGGGAACTTAAATATCTACCAAGTAGCCTATTCATGTTGCCCAATGTTGTTTCCCTCAAAATCGAAGCATGCGCCAAACTTCGAGAATCCTTCAGAAGTTTGGTGCAAAACCCTTCAAAAGCCAATGTTCGTCCAAAATTACGATCACTGAATGTCGAAAATGGTAACTTGTCTAATGAAGATCTTCATGCAATTTTTTGCTACTTTCCAAAATTAGAAGAATTGATTGCTTCAGAGAATAATTTTGTTTGTATCCCTTCATCCATCAAGGAATGTGGTGACTTGACAAGTCTCGATTTGACTGAATGTAAGAAGCTTAAAAAAATTCCTGAATTCACTAACTTGACAATTCTTGATGTTCATCGTTGTTTCAACCTTGAAGAAATTTCAAAGTTGTCGTCAACTGTTCAAAAAGTAGACGCAAGATTTTGCTTCAAGTTAACTAGAGAGACATCAGACATGTTATGGCGTCAGATGAGAGTGAAAGGGACAAATTTGCGCGTTGTTGATCTGCGTTTACTTATCAACGGTCGATATGTTCCTTGCAAAGGGTGTCGCAAATTCAGAATTGAAGCAGAACACATCTTGATCTTTGATCTACGAGTTTTGTTCAGTGACAAGGAGTGGCTTGGCCTTGACGCACTTCTGGAGGAGGAGTGGAATCTGGTCCAGATTGCGTATAAAGCCACTTCCTCCTTTGTGATAAGTGGTTGGGGAGCTTTTGTGTATGAAGAAGACAAAACCAAAATGGATGATCTCCTCTTCACTTCTCCCGATCCCGTGTATTCAGACGAGATGCCACTGGCAATAGTTCCTACAAAAGATGATAGGGAGGAATATAAAATGATCATAGAGAGTCTAGGTTTGGACGAATCATTTAAGAAGACGTTTAAAAAATGGCAGGACAGCAAAGAAAGAAGGGGGTTTGAAGGAATGGCTAAAGACGATTGCATGCATATTGTATTGGGAGAACTAAAGAGAATATCCCAGGATGCTGAGGATGCATTAAAATCAAAAGGAAGATCCAAGCTGAGGCAGATTCTAGATGAGATAAAAAATGATGATGGAGAGCCTAAAGTTACTATCATAGGTGATCTAGCGTTGGTAACACTAAAGGATCCACTGAAACTGCGTAATGTAGAAGAAGCTTCAACCTCTGGCCATACGGGAAGTGAGGAGGAAGGCTATGATCATCAGATGGTAGAAATAGTGAGAGAGATATTTGATGAAGGAATGACGGATGGACTTTTTGAGGCACAGAATAGATTTCCTTCTCTTGATATTGTTGAAAGTAGAAGAGCTTCTTTGGAGAAGGGTTATAGGGTTAGATGGAGCCCTGAAGCGAAAGTGCAAACATCGGTTGAAAGTAGGACATACATAAGTGGAATTTACAGTGGACTCTTAGAAGCAAAGCTGAGGTTTCCTGATTTGGACATGTGGCCAACAATTAATACTGTGGCAAAAAGGAAAGGAATTACAGAAACTTTTGGATCATCCACTGAAGCAAAGCTGAGGCTTCAACGTTTGGATTGGACTACAGGGACTACGTTTGGATCCTCACGACCCTCTGATGCAAATATTCATGGTAATGAAGCAACAAAGTACTTTGGAACCGGAGGTCAAGAGTAA 3393 0.3802 DDESYCIEEIVGKVKEYITPKPLYSGQNPVGLEACIEEVMSLLDMKSDDKTVRMLGIYGLGGIGKTELAKALYNKIVQHFDAASFLSDVREKSNRINGMEDLQKTLLSEMLEGLETELGSTSKGMREIKEKLQKKKVLLVLDDVGDKDQLEKLAGGCNWFGSGSRIIVTTREKDVLIAHQVGNIYEMKELDDQHSLELFCWNAFRQSYPKTGFEDVSVRAVDYAKGLPLALKVIGSDLAAFHESLEDWEMAMKEYEKTPNRKIQDVLKISYDRLDDNAKQIFLDIACFFKGERTEYVKMILEEFRSTTNMKVLLNKSLITIEYDCLKMHDLIQDMGREIVKQESTNPGERSRIWYYEDVTEILTEDYGSDKIQGIMLDPPQREEVNWSGIEFEKMKWLRILIVRNTSFSSELEHLPNHLRLLDWEEYPSKSFPPKFHPKKIVVFNLPRSRLTLEEPFKKFPCLTIMDFSYNQSIKEIPDVSELQNLRELRLDHCRELTAVHGSVGFLKSLAHLSVSDCTKLKNFMSEMFLPSLEFFDLNLCESLGHFPEIRQEMTKPLKIYMINTAIQELPESIGKLTGLVCIDISNNRELKYLPSSLFMLPNVVSLKIEACAKLRESFRSLVQNPSKANVRPKLRSLNVENGNLSNEDLHAIFCYFPKLEELIASENNFVCIPSSIKECGDLTSLDLTECKKLKKIPEFTNLTILDVHRCFNLEEISKLSSTVQKVDARFCFKLTRETSDMLWRQMRVKGTNLRVVDLRLLINGRYVPCKGCRKFRIEAEHILIFDLRVLFSDKEWLGLDALLEEEWNLVQIAYKATSSFVISGWGAFVYEEDKTKMDDLLFTSPDPVYSDEMPLAIVPTKDDREEYKMIIESLGLDESFKKTFKKWQDSKERRGFEGMAKDDCMHIVLGELKRISQDAEDALKSKGRSKLRQILDEIKNDDGEPKVTIIGDLALVTLKDPLKLRNVEEASTSGHTGSEEEGYDHQMVEIVREIFDEGMTDGLFEAQNRFPSLDIVESRRASLEKGYRVRWSPEAKVQTSVESRTYISGIYSGLLEAKLRFPDLDMWPTINTVAKRKGITETFGSSTEAKLRLQRLDWTTGTTFGSSRPSDANIHGNEATKYFGTGGQE* 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2020 1130 Coils Coil 238 258 - -
Pvu8g2020 1130 Gene3D - 189 275 IPR042197 -
Pvu8g2020 1130 Gene3D Ribonuclease Inhibitor 360 552 IPR032675 -
Pvu8g2020 1130 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 747 IPR044974 GO:0006952
Pvu8g2020 1130 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 760 836 IPR044974 GO:0006952
Pvu8g2020 1130 PRINTS Disease resistance protein signature 54 69 - -
Pvu8g2020 1130 PRINTS Disease resistance protein signature 131 145 - -
Pvu8g2020 1130 PRINTS Disease resistance protein signature 224 238 - -
Pvu8g2020 1130 PRINTS Disease resistance protein signature 481 497 - -
Pvu8g2020 1130 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 30 747 - -
Pvu8g2020 1130 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 760 836 - -
Pvu8g2020 1130 Gene3D Ribonuclease Inhibitor 553 746 IPR032675 -
Pvu8g2020 1130 SUPERFAMILY L domain-like 327 719 - -
Pvu8g2020 1130 Pfam NB-ARC domain 34 272 IPR002182 GO:0043531
Pvu8g2020 1130 Gene3D - 18 183 IPR027417 -
Pvu8g2020 1130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 285 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2020 Pvu-Chr8 50192052 50195978 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2020 28 664 WRKY Transcription Factor Family AT4G12020 33.384 1.07e-85 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2020 - - pvu:PHAVU_008G194900g 2227.59