Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2018 ATGAAGGCTGATGATAAAACTGTAAGAATGTTGGGCATATATGGACTTGGTGGAATTGGAAAAACGGAACTTGCCAAAGCTTTGTATGACAAAATTGTGCAACACTTTGATGCAGCAAGTTTTCTTTCCGATGTTAGAGAAAAATCAAACAGAATCAATGGCATGGAAGATCTACAAAAGACACTTTTATCTGAGATGTTGGAGGGGTTGGAAACTGAATTGGGAAGCACAAGTAAAGGAATGCGTGAAATAAAAGAAAAGCTTCAGAAAAAGAAAGTTCTTTTGGTTCTTGATGACGTTGGTGATAAAGATCAGTTAGAAAAGTTGGCAGGAGGGTGTAATTGGTTTGGTTCAGGTAGTAGGATCATTGTAACGACAAGGGAAAAAGATGTGCTAATTGCTCACCAAGTTGGAAATATTTATGAAAAGAAGGAACTTGATGACCAACATTCTTTAGAGCTATTTTGTTGGAATGCCTTCAGACAAAGTTATCCTAAAACAGGTTTTGAAGATGTGTCTGTGCGTGCTGTAGATTACACCAAAGGTCTTCCACTGGCTTTAAAAGTCATAGGCTCTGATTTAGCTACTTTTCATGAAAGTTTAGAAGATTGGGAAATGGCAATGGAAGAATATGAGAAGACTCCAAATAAAAAGATTCAAGATGTGCTTCAAATAAGCTACGATAGATTGGATAATAATGCCAAACAAATTTTCTTGGACATAGCTTGCTTCTTTAAAGGGGAGAGAACGGAATATGTGAAAAAGATACTTGAGGAATTTCGTTCAACATCCAACATGAAAGTACTTCTTAATAAATCTCTCATAACTATCGAGTATGACTGCCTGAAGATGCATGATCTAATACAAGATATGGGAAGAGAGATTGTTAAGCAGGAATCAACAAATCCTGGTGAACGTAGCAGAATATGGTATTATGAAGATGTTACTGAAATTCTAACAGAAGATTATGGAAGTGATAAGATTCAAGGGATTATGCTTAATCCTCCGCAGCGAGAAGAAGTAAATTGGAGTGGAACTGAGTTTGAGAAGATGAAAAGGCTCAGAATTCTCATTGTTCGAAACACATCATTTTCATCTGAACTTGAACATTTACCAAATCATTTAAGACTGCTTGACTGGGAAGAGTATCCTTCAAAGTCTTTCCCACCAAAATTTCATCCGAAGAAAATTGTTGTTTTCAATTTGCCTCGAAGTCGTCTAACATTGGAAGAACCATTTAAGAAATTTCCATGCTTGACTATTATGGACTTTTCATATAACCAAAGTATCAAAGAAATACCTGATGTGTCTGAACTTCAGAATCTAAGAGAACTGAGACTTGATCATTGTAGAGAGCTAACTGCAGTACATGGATCTGTTGGTTTCCTGAAAAGTCTTGCTCATTTAAGTGTTTCAGATTGCACAAAACTCAAAAATTTCATGTCTGAAATGTTTCTACCGTCTTTAGAATTCTTTGACCTTAATTTATGTGAAAGCCTTGGTCACTTCCCAGAGATAAGGCAAGAAATGACAAAGCCATTGAAGATTTATATGATAAATACTGCTATTCAAGAGCTTCCAGAATCCATTGGTAAGCTTACTGGGCTTGTCTGTATAGACATATCAAATAACAGGGAACTTAAATATCTACCAAGTAGCTTATTCATGTTGCCCAATGTTGTTTCCCTCAAAATCGAAGCATGCTCCAAACTTCGAGAATCCTTCAGAAGTTTGGTGCAAAACCCTTCAAAAGCCAATGTTCGTCCAAAATTACGATCACTGAATGTCGAAAATGGTAACTTGTCTGATGAAGATCTTCTTGCAATTTTTTGCTACTTTCCAAAATTAAAAGAATTGATTGCTTCAGAGAATAATTTTATTTTTATCCCTTCATCATCAAGGAATGTGAAGCTTAAAAAAATTCCTGAATTCACTAACTTGAGAATTCTTGATGTTCATCATTGTTTCAACCTTGAAGAAATTTCAGAGTTGTCGTCAACTGTTCAGAAAGTGAAGAAGGAAGGGGTACGTGGAATAGAAGTGGTGATGCCATTTACAACTGAGATTCCAGAATGGTTTAACTATGTGGGTGTCCAAAGGTATCCTCGTTTCTGGGTTCGTAAGAAGTTCCCTAACATTGCTCTGGCCATGATCTTCCACTTCCAAGATGAGAGTGAAAGGGACAAATTTGCTCGTCGCCGCGTTGTTGATCTGCGTTTACTTATCAACGGTCAATATGTTCCTTGCAAAAGGTCTCGCAAATTCAGAATTGAAGCAGAACACATCTTGATCTTTGATCTACGAGTTTTGTTCAGTGACAAGGAGTGGCTTGGCCTTGACCGACTTCTGATGAAGAAGGAGTGGAATCTGGTGCAGATTGCGTATACAGCCACTTCCTCCTTCGTGATAAGTGGTTGGGGAGCTTTTGTGTATGAAGACGAAACCAAAATGGATGATCTCCTATTCACTTCTCCCGATCTCGTGTATTCAGACGAGATGCCACTAACAATAGTTCGTACGAAAGATCCTATGGAGGAATATAAAATGACCATAGAGAGTTTAGGTCTGGACGAATCATTTAGGAAGACGTTGAAGGAATGGCTGGACAAAAAAGAAAGACGGGGGGTTGAAGGAACGCTTGAAGACCATACCATGCAAATTGTATTGGGAGAACTAAAGAGAATATCCCAGGATGCTGAGGATGCATTAAAATCAAAAGGGTCAGCTTTAGAAGATCCAAGATCCAAGCTGAGGCAGATTCTAGATGCGCTAAAAAATGATGATGGAAAGCCTAAAGTTATTATCATAGGTGAACTAGCGTTGGTAAGACTAAAGGATCCAGTGCATAATGTAGAAGAAGCTTCAACCTCTGGCCATACGGGAAGTGAGGAGGAAGGCTATGATCATCAGATGGAAGAAATAGTGAGAGAGATATTTGATGAAGGAATGACGGATGGACTTCTTGAGGCACAGAATAGATTTCCTTCTCTTGATATTATGGAAACCATAAGAGCTGCTTTGGAGAAGGGTTATAGGAATAGATGGAGACCTGAAGATGAAGCGCAAACATCAATTGAAACTAGGACATACATGAATGGAATTTACAGTGGACTCTTAGAAGCAAAGCTGAGGTTTCCTGATTTGGACATGTGGCCAACAATTAATACTGTGGCAAAAAGGAAAGGGATTAGACAAACTTTTGGATCACCCAATGAAGCAAAGCTGAGGCTTCCACATTTGGATTGGACTACAGGGACACCTCCTCACGACCCCCTGATGCAAATATTCATGATGATGAAGCAACAGAGTACTTTGGAACCGGAGGTCAAGAGTAAGCTCTTTTGGAAGTTGAAGGAGGAACACCAAGCTCTGCGTGACAAATTTGCACAACTTGAAAATGAAAATGAAAATGCTGCTCAGAACACAGCCAGCTCTGGGAAAAATCAATATGATAAGTTTGTTGGGAAGAGTCAAGAGAAACTTGATCGTGTGGCAAAGTATGAGAAGGTTAGTGTTGTTTTGAAAGGAAGATGTGAAGAATTAGGGAAGCTATACGATGGTGGGGTTGAAGGGTTCCAGGAATCAGAGGAGTTTGAAGATGTGATGAGTGCAATATACTTGAATGGAGTTAGGGGAGGAGTCCTTGAAGCACGTGCCATCTTACTTACTCTCCATACGGACATAGAAACTGATGAAGGTGTGACTGAGGATCCCGTGATTGAAAGTGAGGAAGAGGAAGCAATAACGTTGGAATTATGGTATGAAGGAATGACAGATGGAGTTCTTGAGGCACAAAATAGATTTCCTTCTCTAGATATTGATGACACCATTACCATTGCCTTGGCGAAGGGTTCTGGGATTGAATGGACACCTGAAGGGATGGAGATAATACCCTCAGCTGAAAATAGAACATACTTGAGTGGAGTTTACGGTGGACTCTTTGAAGCAAAGCTGAGGTTTCCTGATTTGGACGTGTGGGAAACACTAAATACTGTGGCTAATAGGAGAGGGATAAATACAGCTTTTGTATCACCCCCAGAACCAAAGCAGAGGATTCCACAATTGGATTGGACTACAGTGACACTTCCTCCTTCTCACGACCCTCTCATGCAAATATTCATGATGATGAATCAACAAATTCTGGGCAACAGATTTGCACAACTTGAAAAGAAAAATGAAAATGCTGCTGAGAACACAGCGAGCTCTTCCAAAAATCCATATGATGAACTGATTCAGAAATTCAACATTCAATATGATGAGTTTGTTGGGAAGAGACAAGGCAACCTTAATCATGTGGCAGAGTATGAGAAGGTTAGTGGTGTTTTGAAAGGAAGAGGTGAAAAATTAGAGAGGCTATTTAATGGTTTGGTTGAAAAGTTGCAAAAATCAGAGGAGTTTGAGGATTTGATGAGTGTAATATACTTGAATGGACTCGGAGATGGAATCCTTGAAGCACTTGTCATCTTACTTGGACAAAAAAACTGA 4485 0.3906 MKADDKTVRMLGIYGLGGIGKTELAKALYDKIVQHFDAASFLSDVREKSNRINGMEDLQKTLLSEMLEGLETELGSTSKGMREIKEKLQKKKVLLVLDDVGDKDQLEKLAGGCNWFGSGSRIIVTTREKDVLIAHQVGNIYEKKELDDQHSLELFCWNAFRQSYPKTGFEDVSVRAVDYTKGLPLALKVIGSDLATFHESLEDWEMAMEEYEKTPNKKIQDVLQISYDRLDNNAKQIFLDIACFFKGERTEYVKKILEEFRSTSNMKVLLNKSLITIEYDCLKMHDLIQDMGREIVKQESTNPGERSRIWYYEDVTEILTEDYGSDKIQGIMLNPPQREEVNWSGTEFEKMKRLRILIVRNTSFSSELEHLPNHLRLLDWEEYPSKSFPPKFHPKKIVVFNLPRSRLTLEEPFKKFPCLTIMDFSYNQSIKEIPDVSELQNLRELRLDHCRELTAVHGSVGFLKSLAHLSVSDCTKLKNFMSEMFLPSLEFFDLNLCESLGHFPEIRQEMTKPLKIYMINTAIQELPESIGKLTGLVCIDISNNRELKYLPSSLFMLPNVVSLKIEACSKLRESFRSLVQNPSKANVRPKLRSLNVENGNLSDEDLLAIFCYFPKLKELIASENNFIFIPSSSRNVKLKKIPEFTNLRILDVHHCFNLEEISELSSTVQKVKKEGVRGIEVVMPFTTEIPEWFNYVGVQRYPRFWVRKKFPNIALAMIFHFQDESERDKFARRRVVDLRLLINGQYVPCKRSRKFRIEAEHILIFDLRVLFSDKEWLGLDRLLMKKEWNLVQIAYTATSSFVISGWGAFVYEDETKMDDLLFTSPDLVYSDEMPLTIVRTKDPMEEYKMTIESLGLDESFRKTLKEWLDKKERRGVEGTLEDHTMQIVLGELKRISQDAEDALKSKGSALEDPRSKLRQILDALKNDDGKPKVIIIGELALVRLKDPVHNVEEASTSGHTGSEEEGYDHQMEEIVREIFDEGMTDGLLEAQNRFPSLDIMETIRAALEKGYRNRWRPEDEAQTSIETRTYMNGIYSGLLEAKLRFPDLDMWPTINTVAKRKGIRQTFGSPNEAKLRLPHLDWTTGTPPHDPLMQIFMMMKQQSTLEPEVKSKLFWKLKEEHQALRDKFAQLENENENAAQNTASSGKNQYDKFVGKSQEKLDRVAKYEKVSVVLKGRCEELGKLYDGGVEGFQESEEFEDVMSAIYLNGVRGGVLEARAILLTLHTDIETDEGVTEDPVIESEEEEAITLELWYEGMTDGVLEAQNRFPSLDIDDTITIALAKGSGIEWTPEGMEIIPSAENRTYLSGVYGGLFEAKLRFPDLDVWETLNTVANRRGINTAFVSPPEPKQRIPQLDWTTVTLPPSHDPLMQIFMMMNQQILGNRFAQLEKKNENAAENTASSSKNPYDELIQKFNIQYDEFVGKRQGNLNHVAEYEKVSGVLKGRGEKLERLFNGLVEKLQKSEEFEDLMSVIYLNGLGDGILEALVILLGQKN* 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2018 1494 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 6 641 - -
Pvu8g2018 1494 Coils Coil 194 214 - -
Pvu8g2018 1494 Coils Coil 1114 1141 - -
Pvu8g2018 1494 Gene3D Ribonuclease Inhibitor 516 696 IPR032675 -
Pvu8g2018 1494 Gene3D Ribonuclease Inhibitor 339 515 IPR032675 -
Pvu8g2018 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 241 IPR027417 -
Pvu8g2018 1494 Coils Coil 1490 1494 - -
Pvu8g2018 1494 PRINTS Disease resistance protein signature 10 25 - -
Pvu8g2018 1494 PRINTS Disease resistance protein signature 87 101 - -
Pvu8g2018 1494 PRINTS Disease resistance protein signature 180 194 - -
Pvu8g2018 1494 PRINTS Disease resistance protein signature 437 453 - -
Pvu8g2018 1494 SUPERFAMILY L domain-like 332 664 - -
Pvu8g2018 1494 Gene3D - 145 231 IPR042197 -
Pvu8g2018 1494 Coils Coil 1378 1398 - -
Pvu8g2018 1494 Pfam NB-ARC domain 3 229 IPR002182 GO:0043531
Pvu8g2018 1494 Gene3D - 1 138 IPR027417 -
Pvu8g2018 1494 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 641 IPR044974 GO:0006952
Pvu8g2018 1494 SUPERFAMILY "Winged helix" DNA-binding domain 217 319 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2018 Pvu-Chr8 50162363 50175498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2018 8 620 WRKY Transcription Factor Family AT4G12020 32.445 7.36e-78 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2018 - - pvu:PHAVU_008G194700g 2917.49