Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2011 CTAGGAGTCAATAGGAAAAAAGAAGAGATGCAAAGAGAGAAACAAAACTGGTCTAAGGTGAAAGGTATAGCAATGGAAGAGAAAAAATTTAGAGGAGACGGAAAGAAACAAGTTGGGAATGGAGATGCTTGGGCTTCAATGAGGAAGACTGTGTTAGCCAGAGAAGAAAACCATTTTCTTTATGAAGACTTGTCCATGGAAATGCGTGAAAGGAGTCTCAAAAGGAATGGGAAAGAAGTACAAAGTGATTATAAACCATCAAAGAAAATCAAGAGTGCAGAAGGATGTAGCAGAAGCAACAATGATGATGTACTGAGATTATGTTTAACGAAAAGATTTGGTGTTTTCCAACATTATGATAAAGAAGAAGAACAAGAAGAAGAAGAAACAAATCAAAATCCACATAAGAGAATCAAGAGCAAGGAGGGATATAGTAATAGTAAATCAATATTTGAATATTTGTTGGAGGCAGTGTCCTTATTTAGTGAATACGAAGAGGAACAAAATTCACTTAAAAACATGCATGAGTTGAGAAACAATGCAACGTTGCTGCCAAGGCAATTTCAAGAAAAGATACAAGAACTTAATGGATCTGAGGTAAAGTTTGTGACCGAAAAGAAACTTTTTAGCACAGATTTGAACCCAAAGCATGCTCGATTGTCTATTCCACCCACCAAGATTGCCAACAGATTTCTTTCAGAAACCGAGGAGTCGTCATTGAATGAATGTATCAAAGAAAACGGAAGGCTTGCTGGCTTGTCAGTGACTGTGTTGGATCCTTCTTTGAACGAGTGCAAGATGTGCTTGAAGAAGTGGAAAATGGAGAGAAGCTACATCTATAACTTGACCAAGGGATGGAACCAGATTGTGCGTCACAATCATCTCCAACTCCATCATACGCTGCACCTTTGGTCCTTCAGAGTCTCCTCTCATCTGTGTTTCGCACTTGTCAGAATCTGA 960 0.3854 LGVNRKKEEMQREKQNWSKVKGIAMEEKKFRGDGKKQVGNGDAWASMRKTVLAREENHFLYEDLSMEMRERSLKRNGKEVQSDYKPSKKIKSAEGCSRSNNDDVLRLCLTKRFGVFQHYDKEEEQEEEETNQNPHKRIKSKEGYSNSKSIFEYLLEAVSLFSEYEEEQNSLKNMHELRNNATLLPRQFQEKIQELNGSEVKFVTEKKLFSTDLNPKHARLSIPPTKIANRFLSETEESSLNECIKENGRLAGLSVTVLDPSLNECKMCLKKWKMERSYIYNLTKGWNQIVRHNHLQLHHTLHLWSFRVSSHLCFALVRI* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2011 319 Gene3D - 185 319 IPR015300 -
Pvu8g2011 319 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 66 318 - -
Pvu8g2011 319 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 66 318 IPR005508 GO:0003677
Pvu8g2011 319 SUPERFAMILY DNA-binding pseudobarrel domain 204 317 IPR015300 -
Pvu8g2011 319 MobiDBLite consensus disorder prediction 128 142 - -
Pvu8g2011 319 Pfam B3 domain-containing protein At2g31720-like 191 291 IPR005508 GO:0003677
Pvu8g2011 319 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2011 Pvu-Chr8 50040429 50041427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2011 188 316 B3 DNA Binding Superfamily AT1G05930 29.008 1.41e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2011 - - pvu:PHAVU_008G194000g 632.098