Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1999 ATGTCATCCAACAGTTCTTTGAAAGGGGAATTGACAAAGAAGACACCATTTTTGGGGTTGAGACGATGGGTTTTGATTGGGGTAGGTGTTGGTGCATTTATAGTGCTTATTCTTTGTATATTATCGATATGGGTGATGTTTCGGAGAAAGTCTAGGAGATCTTTGGACAAGTATTCTATATCCCAAATACCAAATATCTCCAAAGATATCGACGTTGACAAGGTTGGGGTTTTGAGTTCTCATGTCCAACAAGAAAATGTGCTTACGCCTGTTCATAACAAGATAAGTGATAAGAATTCAGATAATGTATCAGTTCATTTGGGTAACAGAAAATCTGGAGATCCTGATAATATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCAATGTCCGCAGAAGAAGGAAGCTCTGGGAATGTTAAGAAACAATCTACATTGTCACATGGAGGGTTGGCCACTGCCTCTCCATTAGTTGGCTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGAGATCTGGAAATGGCAACCAAACGATTCTCAACGGAGAACATTATTGGTGAGGGTGGATATGGGATTGTTTACAAGGGAAGACTGATTAATGGAATTGAGGTGGCAGTGAAGAAGCTTCTTAATAACTTGGGACAAGCTGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGACATGTTAGACATAAGCATCTTGTACGCCTTCTTGGATATTGTGTAGAGGGAGTTCATAGGCTGCTTGTGTATGAATATGTGAACAATGGTAACTTAGAACAGTGGTTACATGGAGACATGCACCAGCATGGGACACTTACTTGGGAGGCCCGCTTGAAAGTTATACTTGGCACTGCCAAAGCGCTTGCTTATTTACATGAAGCAATAGAACCAAAAGTTATTCATCGGGATATAAAGTCTAGCAACATATTGATTGATGATGAATTCAATGCAAAGGTTTCTGATTTTGGCTTGGCCAAACTTTTGGATTCAGGAGAAAGTCACATAACGACAAGAGTAATGGGAACGTTTGGTTATGTGGCACCAGAATATGCTAACAGTGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCTTGCTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCACGTCCTGCCAATGAGGTTAATCTAGTTGAATGGCTCAAAATGATGGTAGGGACAAGGAGGGCTGAAGAAGTAGTGGACTCAAACCTTCAAGTTAAACCACCGCTGCGTGCTTTGAAGCGCACTCTTTTGGTTGCACTTAGGTGTATTGATCCTGATGCTGACAAGAGGCCCAAAATGAGTCAAGTTGTGAGGATGCTTGAAGCTGATGAATATCCATACCGAGAGGATAGAAGAAACAGAAAGAGTGGCACTGTGAGCATGGAAATTGAACCTGTGAAGGATATTTCTGGTTCATCTGATGCTGAAAAGATGGGGCATGCTGAAAAAACTCAAGGATAG 1518 0.4163 MSSNSSLKGELTKKTPFLGLRRWVLIGVGVGAFIVLILCILSIWVMFRRKSRRSLDKYSISQIPNISKDIDVDKVGVLSSHVQQENVLTPVHNKISDKNSDNVSVHLGNRKSGDPDNISQCSSIYHHERGFSSMSAEEGSSGNVKKQSTLSHGGLATASPLVGLPEFSHLGWGHWFTLRDLEMATKRFSTENIIGEGGYGIVYKGRLINGIEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDMHQHGTLTWEARLKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGTRRAEEVVDSNLQVKPPLRALKRTLLVALRCIDPDADKRPKMSQVVRMLEADEYPYREDRRNRKSGTVSMEIEPVKDISGSSDAEKMGHAEKTQG* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1999 505 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1999 505 PANTHER OS01G0323000 PROTEIN 2 502 - -
Pvu8g1999 505 Gene3D Transferase(Phosphotransferase) domain 1 264 477 - -
Pvu8g1999 505 Pfam Protein kinase domain 189 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1999 505 Coils Coil 208 228 - -
Pvu8g1999 505 PANTHER RECEPTOR-LIKE KINASE PLANT 2 502 - -
Pvu8g1999 505 MobiDBLite consensus disorder prediction 488 505 - -
Pvu8g1999 505 MobiDBLite consensus disorder prediction 466 505 - -
Pvu8g1999 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Pvu8g1999 505 SUPERFAMILY Protein kinase-like (PK-like) 172 461 IPR011009 -
Pvu8g1999 505 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1999 505 MobiDBLite consensus disorder prediction 96 119 - -
Pvu8g1999 505 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Pvu8g1999 505 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
Pvu8g1999 505 CDD STKc_IRAK 194 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1999 Pvu-Chr8 49944909 49949358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1999 19 462 Trihelix Transcription Factor Family AT1G70460 39.911 3.69e-97 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pvu8g1999 Pkinase 7.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1999 - - gmx:100798916 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0341 6 13444265 13448996 Pvu8g1999 8 49944909 49949358 PCT