Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1998 ATGGCGAATGAGAAGGATCGTTTTTATGACCCTTTTCATTACAACCACCATGAACATCAACTCAACCTCTCTTCAAGCTTTCCATCCTTTAGGGACAACAACAACTCTGCACCAATTACCACACAAAACTTTCAAGGCTTTCATCATAGTCCTTCTCATCATCGCACCACTTTCACTGACTGCTTACATGGTTCCATGGATTACAACACCCTCTCTAGAGCCTTTGACATGTCTTGCTCATCATCTGAAGTCATCTCCTCCATTGATGAAAACCCCAAGAAGCCTGGTGCAGGAGACTCAGCAGGGATCAGTGGGAACCAGTCAACACCCAATTCATCGGTCTCCTCCTCGTCCAATGAAGCTGAGGCACTCATAGAAGAAGACTCAACCAAAAGCCAGAAGAAAGATAAGCAACCAAAAGGGTGCGAAGAAGGAGAAGAAAAGCCTAAGAAAGAGAACAAGTCTAAAAAGAAAGAGAAAAAGGCAAGAGAGCCTCGTTTTGCCTTCTTGACTAAAAGTGAGATCGATAACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCCTACCCAAGGAGCTACTATAGGTGCACCAGTCAGAAGTGCAGTGTAAAGAAAAGGGTGGAAAGATCATTCCAAGATCCATCAGTGGTGATCACAACATATGAAGGGCAACACAACCATCACTGTCCAGCAACACTAAGGGGCAGTGCAGCCAGCATGTTGTCAGCACCTCCCTTTTTTGGTTCCTCTTATATGGGCTCAAGCTTACCCCAAGATTTTCTTGCTCAGTTTCTTCCAAGTTATAGCCAAAACGATCACCCAAATCCAATGTTCCACCAAAACCTTTCCCATAATCTCCATCTCCAGCAGCAACAACATCAACAACACCAACACCAGCACCAGTTCCAACTACCTCGTGACTATGGTTTGTTGCAAGACCTACTGCCATCATCATTCCCAGCCAAACAAGAGCCATGA 1002 0.4461 MANEKDRFYDPFHYNHHEHQLNLSSSFPSFRDNNNSAPITTQNFQGFHHSPSHHRTTFTDCLHGSMDYNTLSRAFDMSCSSSEVISSIDENPKKPGAGDSAGISGNQSTPNSSVSSSSNEAEALIEEDSTKSQKKDKQPKGCEEGEEKPKKENKSKKKEKKAREPRFAFLTKSEIDNLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCSVKKRVERSFQDPSVVITTYEGQHNHHCPATLRGSAASMLSAPPFFGSSYMGSSLPQDFLAQFLPSYSQNDHPNPMFHQNLSHNLHLQQQQHQQHQHQHQFQLPRDYGLLQDLLPSSFPAKQEP* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1998 333 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 2 325 - -
Pvu8g1998 333 SMART WRKY_cls 178 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g1998 333 MobiDBLite consensus disorder prediction 86 165 - -
Pvu8g1998 333 ProSiteProfiles WRKY domain profile. 173 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g1998 333 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 2 325 IPR044810 GO:0003700
Pvu8g1998 333 Pfam WRKY DNA -binding domain 179 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g1998 333 MobiDBLite consensus disorder prediction 101 123 - -
Pvu8g1998 333 MobiDBLite consensus disorder prediction 124 165 - -
Pvu8g1998 333 Gene3D WRKY domain 163 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g1998 333 SUPERFAMILY WRKY DNA-binding domain 171 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1998 Pvu-Chr8 49929870 49931980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1998 1 243 WRKY Transcription Factor Family AT4G18170 51.394 1.60e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g1998 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1998 - - gmx:100790175 450.669