Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1996 ATGGCCAACCGTTGGTGGACCGGGAACGTGGCGGTGAGACCCAATGAGCCCAACTCACCGCTTCAGCCGAGAGACCTAGAAAACGGCGACAACGCTAACAACGCCACTCCGACCAACAGCGGCAACAGTAACACCAACGTCAACGCTGGGGAGGATGACGACAACCCCGCAAACAACAACGACGGCGACGAGCAGAACCTTAGCAGCGGGCGACGGCCGAGGGGCAGGCCGCCGGGGTCCAAGAACAAGCCAAAGCCGCCGGTGGTGATAACGAAGGAGAGCCCTAACGCGCTGCGCAGCCACATCCTCGAAATCAGCGGCGGAAGCGACGTGGCGGAGTGCATTGCCACCTTCGCCACGCGCCGCCACCGCGGCGTGTCTGTGCTCAGCGGCAACGGCGTCGTCACCAACGTCACGCTGCGCCAGCCCGCCGCGCCCGGCGGCGTCATCACGCTGCAGGGAAGGTTCGAGATTCTCTCCCTCTCCGGCGCGTTTCTGCCGGCGCCTTCACCGCCGGAGGCCACCGGGATAACCGTGTACCTCGCCGGCGGGCAGGGGCAGGTCGTCGGCGGAAGCGTGGTGGGCCCCCTGATCGCCTCGGGACCTGTGATGGTGGTGGCTGCCACCTTCGCTAATGCTACCTACGAGAGGCTGCCCCTGGAGGAGGAACAAGGCGAAGAGGACATGCAAGAGGTGAATGAAGGTGGTGGGGGTGGAACACCACCACCTTCTCAGGGTGATCAACAGCCACAAGTTCCAATGCCGGTGTATAATTTGGTACCCAACAGTGGTGACGTGTTCTGGGGTCCTCCACCTCAACCTCGCCCTCCTCCTCCACCTTCTAATTATTGA 852 0.6326 MANRWWTGNVAVRPNEPNSPLQPRDLENGDNANNATPTNSGNSNTNVNAGEDDDNPANNNDGDEQNLSSGRRPRGRPPGSKNKPKPPVVITKESPNALRSHILEISGGSDVAECIATFATRRHRGVSVLSGNGVVTNVTLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPEATGITVYLAGGQGQVVGGSVVGPLIASGPVMVVAATFANATYERLPLEEEQGEEDMQEVNEGGGGGTPPPSQGDQQPQVPMPVYNLVPNSGDVFWGPPPQPRPPPPPSNY* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1996 283 MobiDBLite consensus disorder prediction 267 283 - -
Pvu8g1996 283 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 223 - -
Pvu8g1996 283 MobiDBLite consensus disorder prediction 219 283 - -
Pvu8g1996 283 MobiDBLite consensus disorder prediction 12 66 - -
Pvu8g1996 283 MobiDBLite consensus disorder prediction 1 95 - -
Pvu8g1996 283 ProSiteProfiles PPC domain profile profile. 95 232 IPR005175 -
Pvu8g1996 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 274 IPR014476 GO:0003680
Pvu8g1996 283 CDD DUF296 99 182 IPR005175 -
Pvu8g1996 283 MobiDBLite consensus disorder prediction 242 256 - -
Pvu8g1996 283 Gene3D - 98 231 - -
Pvu8g1996 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17 274 - -
Pvu8g1996 283 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 211 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1996 Pvu-Chr8 49908352 49909203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1996 71 262 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 67.179 1.34e-73 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1996 - - aprc:113874473 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1996 8 49908352 49909203 Pvu8g1996 8 49908352 49909203 ECH