Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1990 ATGGAGTCTGTGGTGTCAGAGCTAGAAGGAACGCTTCTGAAGGACTCGGATGCATTCTCCTACTTCATGTTGGTGGCGTTTGAAGCGTCAGGTTTGGTTCGTTTTGCCTTGTTGCTAGCACTATGGCCCGTGATTCGGTTCCTTGACATGGTTGGCATGGACGATGTGTCTCTCAAGTTGATGATCTTTGTGGCTGTGGCTGGGGTTCCCAAGTCCGAGATTGAGTCTGTGGCCAGGGCAGTTTTGCCCAAGTTCTACATGGATGATCTTGACATGGAGAAGTGGAAGGTGTTCAGCTCCTATGAGAAGAGGGTTGTGGTCACCAAGACGCCAGAAATCATGGTGGAGATGTTCGTGAAGGAGCATCTACATGCAGATGAGGTCGTCGGAACCCAACTCTCCTTCAATAGGTTTGACCTCGCCACTGGTTTTGTCCATGGTCACTCCAGTAATACCATTTCTCAAAGGGTTGCCAACCTTCTCAGCAATGGCGCACCCACTTTGGTTATGGACCAATCACATCCACCGGTTTTGACTGACCAAAACTACGACCACCAGCTGCTCCGGCCACTTCCGGTGATTTTCCACGACGGCCGCCTTGTGAAGCGGCCAACGCCGTCCACCTCCCTACTAATCCTCCTATGGATGCCGGTGGGCATTGTACTCGCCATATTCCGCATCGCCCTTGGCTCCATTCTACCCTTTTGGTCTATTCCCTACACGTCAAGGCTATTCACTGGCAAGATCATCGTAAAGGGCAAACCACCCGTCCCTCCCTCCGGCAGCAACTCCGGCGTCCTCTTCGTCTGCACCCACCGCACCCTACTGGACCCCGTCGTCCTCTCCTCCGTCCTCCGCCGCAGAATCCCGGCGGTCACGTACTCCATCTCGCGGTTGTCGGAGATCCTCTCCCCCATCCCCACCGTAAGGCTGACGAGAACACGCCATGTGGATGCTGAGAAAATCAAACAAGAGTTATCCAAAGGTGACTTAGTAGTGTGTCCCGAAGGAACAACATGTCGCGAGCCTTTCCTTTTGAGGTTCAGTGCCCTCTTCGCCGAGCTCACAGACCGAATAGTGCCCGTGGCCATGAACTACAGGGTAGGGTTCTTCCACGCGACAACTGCGAGGGGTTGGAAGGGTTTGGACCCCATTTTCTTCTTCATGAACCCTAGACCGGTGTACGAGGTTACTTTCTTGAACCAGTTGCCGGTAGAAGCCACTTGTTCTTCGGGGAAGAGTCCACACGACGTGGCTAACTACGTGCAGAGGCTACTAGCGGCGACGCTAGGGTTTGAGTGCACCAACTTTACTCGGAAGGACAAGTACAAGGTGTTGGCCGGGAATGATGGCACGGCGTCTCCCACTTTTTCATTGGTGGATCAGATGGTGAAGGTGGTGAGAACGTTCATACTGTGA 1419 0.5356 MESVVSELEGTLLKDSDAFSYFMLVAFEASGLVRFALLLALWPVIRFLDMVGMDDVSLKLMIFVAVAGVPKSEIESVARAVLPKFYMDDLDMEKWKVFSSYEKRVVVTKTPEIMVEMFVKEHLHADEVVGTQLSFNRFDLATGFVHGHSSNTISQRVANLLSNGAPTLVMDQSHPPVLTDQNYDHQLLRPLPVIFHDGRLVKRPTPSTSLLILLWMPVGIVLAIFRIALGSILPFWSIPYTSRLFTGKIIVKGKPPVPPSGSNSGVLFVCTHRTLLDPVVLSSVLRRRIPAVTYSISRLSEILSPIPTVRLTRTRHVDAEKIKQELSKGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVYEVTFLNQLPVEATCSSGKSPHDVANYVQRLLAATLGFECTNFTRKDKYKVLAGNDGTASPTFSLVDQMVKVVRTFIL* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1990 472 Pfam haloacid dehalogenase-like hydrolase 5 154 - -
Pvu8g1990 472 Pfam Acyltransferase 250 355 IPR002123 GO:0016746
Pvu8g1990 472 SMART plsc_2 266 367 IPR002123 GO:0016746
Pvu8g1990 472 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 7 2 465 - -
Pvu8g1990 472 PANTHER ANCIENT UBIQUITOUS PROTEIN 2 465 - -
Pvu8g1990 472 CDD LPLAT 248 427 - -
Pvu8g1990 472 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 205 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1990 Pvu-Chr8 49830490 49833040 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1990 3 470 Organic Solute Cotransporters AT3G11430 71.458 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1990 K13508 - gmx:100788698 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1990 8 49830490 49833040 Pvu8g1990 8 49830490 49833040 ECH
Pvu8g1990 8 49830490 49833040 Pvu6g0349 6 13591878 13594483 PCT