Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1985 ATGCAGCAAGATCACAGAAAAAAGGGTTCAATGGAGATGGATTTTTTCTCTGATTATGGCGATGCCAACAGGTACAAAATTCAAGAGGTCATTGGGAAAGGAAGTTATGGTGTTGTTTGTTCAGCTATTGACACTCATACTGGCGAGAAAGTAGCAATTAAAAAGATACATGACATCTTCGAGCATGTATCTGATACTGCACGTATTCTTCGTGAGATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATTAAGCATGTTATGTTGCCTCCTTCGAGGAGGGACTTTAAAGATATTTACGTCGTTTTTGAGCTAATGGAGTCTGATCTGCATCAAGTCATAAAAGCCAATGATGACTTAACAAAAGAGCACTATCAATTTTTTCTTTACCAGTTACTTCGAGCATTGAAGTATATTCACACTGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATATTAGCCAATGCAAACTGTAAACTTAAAATATGTGATTTTGGGTTAGCTCGAGTTGCTTTTAGTGACACACCAACAACTGTATTTTGGACGGATTATGTCGCTACAAGGTGGTATAGAGCACCAGAGCTCTGTGGTTCCTTTTACTCCAGGTATACTCCAGCAATTGATATTTGGAGCATAGGTTGCATCTTTGCTGAAGTATTGATAGGAAAGCCTCTTTTTCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACAGATCTGCTTGGTACTCCCTCACTGGATACTATATCCCGGGTACGCAATGATAAGGCACGGCGATACCTGACTAGTATGAGGAAAAAGCAGCCTATACCATTTGCACAAAAATTTCCGAACGCAGATCCTTTAGCGCTACGACTACTTGAAAAGTTGCTCGCCTTTGATCCGAAAGACCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTTGCGAAAGTTGAGAGGGAACCATCATGCCAGCCTATTACAAAAATGGAGTTTGAATTTGAAAGGAGAAGGGTCACAAAGGAAGAAATTGGAGAGTTAATTTTTCGTGAGATTCTAGAGTACCATCCTCAACTATTAAAAGACTACATAAATGGAACAGAGAGAACTAATTTTCTTTACCCAAGTGCTGTTGATCAATTCAAAAAGCAGTTTGCTCATCTTGAGGAAACTGGTGGCAAAAGTAGTCCAGTTATGCTACCTGAAAGAAAGCATGTATCACTTCCCAGGTCAACAATTATACATTCAAATATAGTATCCACAAAAGAGCAATCAAATATTACTTCAAGCAAAAACAGGCAAACAACTGAGGAATACAACAATAATTCCCGGGATACAGACAATCCTGCCCCAAGGTCCATTCAGGGTCTGCAAAAATTTTCACTTGCAAAACCTGGTAAAGTTGTTGGGCCGGTTATTCCTTACGAGTATGCAAGTGTTGTCAAGGGTTCATATGAGCCCAGAACATTTATGAGAGGTTCTGTTCTTCCTTCTCAACCTACTCCCCCGACGAGTCATTATCAAAGATTAACCCCTGGGAAACAAGAAAGGTCAGCAACAGCAACAGAAGCTGACAAGTGTGTATCTTTACAATCAAAACTTGCACAGCAATGTTGTGTGAATGGCCAAATAGCACCAGAAATAGCTATAAATATTGATTCCAACCCTTTTTTCATGACACGAGCAGGAGTGAACAAGATAGAGCAGGATGACCGAATAGGCATTGACACAAAGTTGCTGCAATCAAAGACTCATCAATATGGTGGGATTAGTACTACTGCTCATAGAAAGGTTGGATCGGTTCAGTATGGTATAACAAGGTTGTTCTAG 1842 0.4001 MQQDHRKKGSMEMDFFSDYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHVSDTARILREIKLLRLLRHPDIVEIKHVMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSRYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPIPFAQKFPNADPLALRLLEKLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIGELIFREILEYHPQLLKDYINGTERTNFLYPSAVDQFKKQFAHLEETGGKSSPVMLPERKHVSLPRSTIIHSNIVSTKEQSNITSSKNRQTTEEYNNNSRDTDNPAPRSIQGLQKFSLAKPGKVVGPVIPYEYASVVKGSYEPRTFMRGSVLPSQPTPPTSHYQRLTPGKQERSATATEADKCVSLQSKLAQQCCVNGQIAPEIAINIDSNPFFMTRAGVNKIEQDDRIGIDTKLLQSKTHQYGGISTTAHRKVGSVQYGITRLF* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1985 613 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1985 613 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Pvu8g1985 613 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1985 613 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Pvu8g1985 613 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pvu8g1985 613 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 493 - -
Pvu8g1985 613 MobiDBLite consensus disorder prediction 497 522 - -
Pvu8g1985 613 MobiDBLite consensus disorder prediction 498 522 - -
Pvu8g1985 613 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Pvu8g1985 613 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 493 - -
Pvu8g1985 613 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Pvu8g1985 613 MobiDBLite consensus disorder prediction 415 457 - -
Pvu8g1985 613 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1985 613 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1985 Pvu-Chr8 49722993 49729169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1985 1 445 MAP Kinase Gene Family AT2G42880 85.618 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pvu8g1985 Pkinase 5.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1985 - - gmx:100811788 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0354 6 13767639 13774715 Pvu8g1985 8 49722993 49729169 PCT