Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1976 TTTTATCAGCAAGAATCATCCAAGTTAAAAAGACAAATCAGAGACATTCAAAATCTAAACAGGCACATCCTTGGTGAAGCTCTTAGTTCTCTAAGTCTAAAGGAATTAAAGAATCTTGAGAGTAGATTGGAGAAAGGTTTGAGCAGAGTTAGATCCAGAAAGCATGAGACATTGTTTGCGGATATCGAGTTCATGCAAAAGCGGGAAATGGAGCTGCAAAACCACAATAATTTTCTGCGAGCTAAGATAGCTGAACACGAGAGAGAACAACAACAACATATGACAGGAAGTGTGTGCGAGTCCTTACCACCTTCACAATCATATGACAGGAATTTCTTCCCTGTAAATCTCATAGATTCCAGTCATCAATACTCACGTCAAGACCAGACTGCTCTTCAACTTGTCTGA 408 0.3946 FYQQESSKLKRQIRDIQNLNRHILGEALSSLSLKELKNLESRLEKGLSRVRSRKHETLFADIEFMQKREMELQNHNNFLRAKIAEHEREQQQHMTGSVCESLPPSQSYDRNFFPVNLIDSSHQYSRQDQTALQLV* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1976 135 Coils Coil 69 89 - -
Pvu8g1976 135 Coils Coil 33 53 - -
Pvu8g1976 135 PANTHER MADS BOX PROTEIN 3 129 - -
Pvu8g1976 135 ProSiteProfiles K-box domain profile. 1 89 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu8g1976 135 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED 3 129 - -
Pvu8g1976 135 Pfam K-box region 2 83 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu8g1976 135 Coils Coil 2 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1976 Pvu-Chr8 49615739 49620676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1976 1 135 MADS-box Gene Family AT3G58780 58.621 6.81e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1976 K09264 - pvu:PHAVU_008G1906000 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0361 6 13940993 13945101 Pvu8g1976 8 49615739 49620676 PCT