Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1959 ATGGGTGCTGCTGTCGTAGAGTGTTACCCGCCGCCGCGCACGGCGGTGCTGTCTCTCAACACACTGCCGCTAGGCTTCCGTTTCCGTCCCACCGATGAAGAGCTTATTGATTACTATCTGCGCTCGAAGATCAACGGAAACGGGGACGATGTTTGGGTTATCCGTGAAATTGATGTCTGCAAATGGGAGCCTTGGGATTTGCCTGATTTGTCGGTGGTACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGATCGGAAGTATCCCAATGGGCACAGGTTGAACCGAGCTACGAGCCTTGGGTATTGGAAAGCAACGGGGAAGGATCGAAGGATTAAGTCTGGGTCCACTTTGATTGGAATGAAGAAGACTCTTGTTTTCTATACTGGTCGTGCACCGAAGGGGAAGAGAACCAATTGGGTTATGCATGAGTACAGGCCTACCCTGAAGGAGCTCGATGGTACCAATCCTGGACAGAATCCGTATGTCCTTTGTCGCTTATTTAAAAAACATGATGAGAGTCTTGAAGCTTCAAATGGTGAAGTGGAACGGGCTGCTTCAACCCCTATGACTGCCAATCACTCTCCAGATGAAATACAATCTGATTCCTCTCTGGATCCAGCATCTTCCTCACAGATTACTGAAGGTGAAAAGCCTCTAACAGTTATCCCTGAGAACTCTGAAGAAGTAATATCCAACATTATAACTCCAGTTGACTCCCATAGTGATGGATGTGATGCTCGGGATGCACAAAATCAGATTGTAGAACTAGCTTCAGAGCAGGATCAGGCATTTAACTTTGAGGATTTTTATGACCCAACAAACCAGCAATTAGATGACAAATTATTCTCCCCAGTCCATGCTCATTTCCCACCAGAAATTTACTATCAATCAGAACTTCAGTATGGTACAAATGACAATATGTCTGACCTTTTTGACTCAGTTAATTGGGATGCGATCTCCTATGATACTAGCAGTCTAGAGCCATGCTCATCCCTCCTCAATGTTAAGGACCATGGATCAGGCAGTGACTCAGATGTGGAAATGGCCAATATGACGAATCCGCAGGCATTGCATGGTTATCCTAAGGAGGCAGTTGAGCAGAAGAGCAATGTAGGATTATTTCAGAACAGTCCCGAGATGGCTTTCTCAAACGATGGTTCTATGGGCGAAGTGGACTATACGACCAAGAATTGTGGGCAACTAAGAAACTTTGATGCGTTTAATAATAATGGTGGTACTGGAATCAGAATAAGGTCTCGTCAAGGACGAACTGAACAGCCAAACATGAATGGAATGGTACCATCACAAGGTAATGCACCAAGGAGAATACGGTTGCTTGTTGGGCGTGGGCCTCCGTTTGGTTCTGAGGAGGCGGCAAAAGATGGAAGTTGTGCTTGTGCCCCAGAAGACCATAATTCAAAAACCATCAATACTAGGGAGTGGAAAGCTTCAGACAACCAAGCTGCCGACGAGAGTTCCGCCGTTGCTGATGATGTGGATGAACGAGAGAAGGAATCTCCGGAGTCATCTGACTTAGGAAAGATCACTCAACAGCATGTTGCAACTGCAGAATCCATCTCAAAAGACCATCTACAGGTTTCGTCTAACCGTGGCATGTGGTCTTATGTTCTTGGAGTTTCTGCAACTGTGTTGGTTTCAGTAATACTCGTTGTTAATATATGGGCATATGTGAGATCTTAA 1710 0.4585 MGAAVVECYPPPRTAVLSLNTLPLGFRFRPTDEELIDYYLRSKINGNGDDVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATSLGYWKATGKDRRIKSGSTLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKHDESLEASNGEVERAASTPMTANHSPDEIQSDSSLDPASSSQITEGEKPLTVIPENSEEVISNIITPVDSHSDGCDARDAQNQIVELASEQDQAFNFEDFYDPTNQQLDDKLFSPVHAHFPPEIYYQSELQYGTNDNMSDLFDSVNWDAISYDTSSLEPCSSLLNVKDHGSGSDSDVEMANMTNPQALHGYPKEAVEQKSNVGLFQNSPEMAFSNDGSMGEVDYTTKNCGQLRNFDAFNNNGGTGIRIRSRQGRTEQPNMNGMVPSQGNAPRRIRLLVGRGPPFGSEEAAKDGSCACAPEDHNSKTINTREWKASDNQAADESSAVADDVDEREKESPESSDLGKITQQHVATAESISKDHLQVSSNRGMWSYVLGVSATVLVSVILVVNIWAYVRS* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1959 569 MobiDBLite consensus disorder prediction 450 519 - -
Pvu8g1959 569 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
Pvu8g1959 569 Pfam No apical meristem (NAM) protein 23 148 IPR003441 GO:0003677|GO:0006355
Pvu8g1959 569 MobiDBLite consensus disorder prediction 498 513 - -
Pvu8g1959 569 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 17 430 - -
Pvu8g1959 569 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 430 - -
Pvu8g1959 569 Gene3D NAC domain 31 176 IPR036093 GO:0003677|GO:0006355
Pvu8g1959 569 SUPERFAMILY NAC domain 15 172 IPR036093 GO:0003677|GO:0006355
Pvu8g1959 569 MobiDBLite consensus disorder prediction 178 223 - -
Pvu8g1959 569 MobiDBLite consensus disorder prediction 186 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1959 Pvu-Chr8 49328054 49331888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1959 15 448 NAC Transcription Factor Family AT4G35580 42.953 2.32e-95 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu8g1959 NAM 5.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1959 - - vun:114194396 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1959 8 49328054 49331888 Pvu9g0407 9 8001373 8005081 PCT