Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1956 ATGAAAACTCTCAAGGAATGGTTCACTTCATCACAGACTCTATTGAGCATGTTGCTAGTGCAAGTTCTTCTAACTGGGATGCAGTTGCTTTCAAGGGTTATATTAGTTCAAGGAACTTTCATTGGTGCACTTATTGTTTATCGTCACCTTGTTGCTGCTATTTGTGTTGCCCCCTTTGCACTCTACTTTGAAAGGATGGCCATGGCTCAAGGATTGTTTTATTATGGTCTGCGAGACACTTCAGCTACTTACTCTATGAGTTTTCTCAACTTGGTTCCTATAACCACTTTCTTTACCTCTATCATATTAAGAATGGAGAAACTGAAGTGGCAAACATGGGTTGGTAAAGCTAAGTCTGTTGGGTCAATTATGTGTGTTGGAGGAGCATTAGTTAGCAGTGTTTACAAAGGGAGGGAATTTTATCTTGATCATCACAATCATCATACTCATCAAACTGCACCACACAAAACCCACATGCTACATGGTACTATCTTTTTGATTTGCAGCTGCTTCTCATACACAACCTGGTTTATTGCACAAGTGAAGTTGCTTAAAGTATTTCCATTCAAGTACTGGGGAACAATGCTAGCATGCATTCTGGCAGCAATTCAAGCAGCAGTAATTGGTGTTTGTTTAGATTCCAGTAAAGCTGCTTGGAGATTAGAGTGGAATCTACAACTCATCACTATACTATACTCAGGTGCACTGGCTACTGCTGCTACCTTCTGCATACTATCCTGGGCAATAACAATCCAAGGACCTAGTTATCCTCCAATGTTCAATCCCCTTTCTCTCATTTTTGTGGCCTTTTCAGAAGCTGTCATACTTGGAGAACCACTAACCTTTGGAATGTTGGTTGGCATGGTTTTGATCATAATGGGATTGTACTCCTTTTTGTGGAGCAAAAAAAATGACACACAGAAGTTGTCTCAGCCAAATGTTGCAGCTGCAGAAGGATCAACCATGATGGCTGATGGACTCACTGCGACTCAATCAACATCCACAGTAGTACCAAGTGCTTCACCCACCACCGATTCTGTGATTCTTGAAATTGAAAAGACTGAGAATAATTAA 1074 0.4069 MKTLKEWFTSSQTLLSMLLVQVLLTGMQLLSRVILVQGTFIGALIVYRHLVAAICVAPFALYFERMAMAQGLFYYGLRDTSATYSMSFLNLVPITTFFTSIILRMEKLKWQTWVGKAKSVGSIMCVGGALVSSVYKGREFYLDHHNHHTHQTAPHKTHMLHGTIFLICSCFSYTTWFIAQVKLLKVFPFKYWGTMLACILAAIQAAVIGVCLDSSKAAWRLEWNLQLITILYSGALATAATFCILSWAITIQGPSYPPMFNPLSLIFVAFSEAVILGEPLTFGMLVGMVLIIMGLYSFLWSKKNDTQKLSQPNVAAAEGSTMMADGLTATQSTSTVVPSASPTTDSVILEIEKTENN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1956 357 Pfam EamA-like transporter family 162 298 IPR000620 GO:0016020|GO:0016021
Pvu8g1956 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 303 - -
Pvu8g1956 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 126 - -
Pvu8g1956 357 PANTHER WAT1-RELATED PROTEIN 11 66 - -
Pvu8g1956 357 PANTHER WAT1-RELATED PROTEIN 66 324 - -
Pvu8g1956 357 PANTHER WAT1-RELATED PROTEIN 11 66 IPR030184 GO:0016021|GO:0022857
Pvu8g1956 357 PANTHER WAT1-RELATED PROTEIN 66 324 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1956 Pvu-Chr8 49283393 49290512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1956 5 357 Nodulin-like Gene Family AT5G07050 25.907 7.51e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1956 - - vra:106763417 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1956 8 49283393 49290512 Pvu9g0409 9 8034179 8044467 PCT