Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1955 ATGCATTCAATGGCTTCTTCCTTCTGCAATATCTTCCTCATACTTTGTTTGTTCAATGTTCTGGCCTCCATAGGGCCATATCCAGTTGCAGTTCATTCAGCTGGTGATGTTCCAATTAATGTGACCAAGCACTTTTCCTTCTACAATTTCAGCTTCAGCAACAACCCCAGACTAGTCCATGATGTGAAGCTCCTTGGCAGTGCCAAGTTCTCAAGTGAAAAGGGTTCTCTTCAAATCCCAGATGAGTCAGAATACACGGATATAAGACACCAAGCAGGTAGAGGCATCTATTCCTTCCCAATTCGCCTGCTAGATCCAACCACCAAGACCCCGGCTTCCTTTCAAACAACTTTCTCTTTTCAACTCAACAATTCCACTGCCTCTGAGCAAGCTGCTTATGGAGGTAGTGGCCTCACTTTCATTATTGTCCCTGATGAATTCACTGTGGGAAGGCCAGGGCCATGGCTTGGCATGCTCAATGATGCTTGTGAGAATGACTACAAGGCCGTGGCTGTGGAGTTTGACACAAGAAAGAATCCAGAGTTTGGAGATCCAAATGACAACCATGTTGGCATCAACTTAGGTACCATAGTATCTACCAAAGTTATCAATGTTTCTGATGTTGGAGTTTCCCTTAAGGATGGTTTTGTTCACCGCGCTTGGATCACCTATGATGGTCCTCAAAGGAGAATGGATATTCGTCTTGGAAGGGCTAATGAAGAGGATTATCCTTCCATACCTATCTTCTCAGAATCTATGGATCTCTCTCCTTATCTGAATGAGTACATGTTTGTGGGGTTCTCAGCTTCCACCGGTAACCATACACAAATCCACAACATACTCTCCTGGAACTTCACTTCTACAAGCCAAGCTTTTCTTCGCTTCCCTTCATCTGAAACCTGCCAGGGTAAGATCTTACTAGAGAATAGTACAGCACCACCAACTGCTGAGAAGTCTTCTAAGAATGAGCCACCAAGAAGCTTTTTGATTTTTATGGTTGCTGTGGCATTGGCTCTGGCTCTTTTCCTTGGCTTTTACTTCATTAGTAAGTACAGGAGAAATGCTTCCAAATTAAACACTTCATTGGAGACAGAGATTCACTTGCCAAGGCCTCCAAATAAACCACGCCGCTTCACATTTTCTCAGCTTTCATCTTCAACTCGGTCATTCAGTGAGATAGAGTTGCTTGGCAGTGATTCTAGAGGAGAATACTACAGAGGAAAGCTTTCTAATGGAAGCCAGGTGGCTGTGAAAAGGTTCTCAACTCAGTTTCTCAACACACATGGATCAGACAAGAAGCGTTTGCTGAAGGAAATCAAAATCATTGGCCATGTTCGCCACCCGAATTTGCTTCCTGTTAGAGGATGGTGTCAAGACAACCATGAAGTCATGGTGGTCTATGACTTCGTTCCCAATGGCAGCCTGGACAAATGGTTATTTGGGGCTGGTGTTCTTCCATGGACTAGGAGGTTCAAAGTTATTAAGGATGTAGCTGATGGCTTGAGCTTCCTCCACACTAAGCTACTAGCCCACAAGAACTTGAAATGCAGCAGTGTGTTTCTAGATGTCAACTTCAGAGCTGTTTTGGGTGATTTTGGGTTTGTGCTGTTGGGGGCTGAATCAAAACAGTTTGAGTCAGCAGTGTGCCATGGCGCAGATGTGTTTGAGTTTGGTGTCCTTGTGTTGGAAGTGATAGCTGGAAGGGTAAGGGATGAGAAAGAGGTGGGAAATCCAGAAGAGAGGAACCTATTGGATTATGCTTGGAACTTGCATCAGATTGATGAGAAAGTTAAGCTGGTGGACAGAAGGATGGGATCATTGATCAACTTGGACCAGGCAATTCGTGTTCTAGAAATTGGGTTGCTTTGCACCCTAAATGAGAACAAAGGAAGACCCTCGATGGAGCAAGTGGTGGAGTTTCTTCTGAACATGGATAAGCCCATTCCTGAACTGCCAAGAACTCGTCCTGTTTCCTTGTTCCCCTATAATAGCGCCAACACAGGACTTTGCAACACATATTCTTGTACTTTTTAG 2034 0.444 MHSMASSFCNIFLILCLFNVLASIGPYPVAVHSAGDVPINVTKHFSFYNFSFSNNPRLVHDVKLLGSAKFSSEKGSLQIPDESEYTDIRHQAGRGIYSFPIRLLDPTTKTPASFQTTFSFQLNNSTASEQAAYGGSGLTFIIVPDEFTVGRPGPWLGMLNDACENDYKAVAVEFDTRKNPEFGDPNDNHVGINLGTIVSTKVINVSDVGVSLKDGFVHRAWITYDGPQRRMDIRLGRANEEDYPSIPIFSESMDLSPYLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQAFLRFPSSETCQGKILLENSTAPPTAEKSSKNEPPRSFLIFMVAVALALALFLGFYFISKYRRNASKLNTSLETEIHLPRPPNKPRRFTFSQLSSSTRSFSEIELLGSDSRGEYYRGKLSNGSQVAVKRFSTQFLNTHGSDKKRLLKEIKIIGHVRHPNLLPVRGWCQDNHEVMVVYDFVPNGSLDKWLFGAGVLPWTRRFKVIKDVADGLSFLHTKLLAHKNLKCSSVFLDVNFRAVLGDFGFVLLGAESKQFESAVCHGADVFEFGVLVLEVIAGRVRDEKEVGNPEERNLLDYAWNLHQIDEKVKLVDRRMGSLINLDQAIRVLEIGLLCTLNENKGRPSMEQVVEFLLNMDKPIPELPRTRPVSLFPYNSANTGLCNTYSCTF* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1955 677 ProSiteProfiles Protein kinase domain profile. 390 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1955 677 Pfam Protein tyrosine and serine/threonine kinase 394 535 IPR001245 GO:0004672|GO:0006468
Pvu8g1955 677 Pfam Legume lectin domain 44 290 IPR001220 GO:0030246
Pvu8g1955 677 Gene3D - 42 292 - -
Pvu8g1955 677 SUPERFAMILY Protein kinase-like (PK-like) 367 641 IPR011009 -
Pvu8g1955 677 CDD lectin_legume_LecRK_Arcelin_ConA 44 288 IPR001220 GO:0030246
Pvu8g1955 677 Gene3D Transferase(Phosphotransferase) domain 1 549 647 - -
Pvu8g1955 677 Gene3D Phosphorylase Kinase; domain 1 350 469 - -
Pvu8g1955 677 Gene3D Transferase(Phosphotransferase) domain 1 470 548 - -
Pvu8g1955 677 PANTHER - 13 659 - -
Pvu8g1955 677 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 13 659 - -
Pvu8g1955 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 46 289 IPR013320 -
Pvu8g1955 677 ProSitePatterns Legume lectins beta-chain signature. 170 176 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1955 Pvu-Chr8 49258993 49261865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1955 43 660 Receptor kinase-like Gene Family AT5G55830 31.707 9.73e-94 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu8g1955 Lectin_legB 2.9e-56 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1955 - - gmx:100781464 1208.36