Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1937 ATGAAGTTCCAACTCCATGCTGTTACATTTGTTCTGCTAAGCTTCATAATGTCTCTCTTTGGCCTGATTGTAGCTGACTTGAACTCCGACAGACAAGCTCTCCTTGAGTTCTTTTCAAATGTTCCACATGCCCCAAGGTTAAATTGGAGTGAGTCCACTCCAATTTGTACTTCTTGGGCTGGTGTGACTTGCAACAAAAATGAAACTAGTGTAATCAGCATCCGTCTTCCAGGGGCAGGTTTCAAGGGTTCCATTCCAGAGAACAGCCTAGGAAAGCTCAATTCTCTTAAAATTCTGAGCCTTCACTCCAATGGCCTTAGAGGAAACCTTCCTTCTGACATCCTCTCTATTCCTTCACTCCAATATGTAAACCTGCAGCAAAATTACTTCTCAGGTCTAATCCCTTCTTCTATCTCCCCTAAACTCGTAGCATTAGATATTTCCTCTAACAATTTCTCGGGAAGTATCCCACCTACCCTTCAGAATCTCAGTAGACTCACCTGGTTGTATCTCCAAAACAACTCCCTCTCTGGGGCTATTCCTGACTTCAACTTTCCAAGTCTCAAGTATTTGAATTTGAGCTATAACAACTTGAATGGCTCAATTCCAAATTCCATCAACAATTATCCGTACACTTCTTTTGCTGGGAACTCTCATTTGTGTGGACCACCTCTCAATAAGTGTTCTGCAGCCTCAACTCCATCTTCTTCTTCCTCCCTTTCTCCTTCTCCTGTTTATCAACCACTCTCTCCAGCAGCAGCTCCCCAAAATAGAAATGCTACCACTTCAAAGAGTTACTTTAGCCTAGCTTCTATACTTGCTCTGGCAATTGGGGGCTGCGCCTTCTTGTCTCTCCTGGTTTTGGTGATGTTTGTATGCTGTTTAAAGAAGAACAAGAGTCAAAGTAGTGGCATACTTACAGGAAAGGCACCGTGTTCTGGAAAGAGTGAGGTTTCAAAGAGTTTTGGGAGTGGGGTGCAAGACATTGAAAAAAACAGGTTGTTTTTCTTTGAAGGTTGCTCTTACAGCTTTGACCTTGAAGATTTGTTAAAGGCTTCAGCTGAAGTTCTTGGAAAGGGGAGCTATGGAACAACATATAGGGCTGCTTTGGAGGATGGAACAGCAGTGGTAGTTAAAAGGTTGAGGGAAGTTCTAGTTGGAAAGAAGGAGTTTGAGCAGCAGATGGAGGTTGTAGGAAGAATTGGTCGGCATCCCAATGTTATGCCCCTAAGAGCTTTTTACTTTTCCAAAGATGAGAAACTTCTAGTATATGACTACATGCCTGGAGGCAGCTTGTTTTCCTTGTTGCATGGAAACAGAGGCATGGGAAGAGCTCCATTAGACTGGGATTCAAGAATGAAGATAGCACTTGGAGCTGCAAAGGGAATTGCTTCCATTCACACCGACCACATGGATTCAAAACTTACTCATGGCAACATCAAGTCCTCGAATGTGCTCATAACCCAAGAACACGATGGCTGCATCACTGATGTAGGACTCACTCCTGTGATGACCACCCAATCAACCATGTCAAAAACCAACGGCTACCGTGCTCCCGAAGTAACCGAGTACCGGAGGATCACTCAGAAGTCTGATGTTTACAGCTTTGGAGTGCTCCTTCTTGAAATGCTCACTGGCAAGGCTCCAATGGGATATTCTGGCTATGAGGACATGGTTGATCTACCAAGATGGGTGAGGTCCGTGGTTCGAGAGGAATGGACTGCTGAAGTTTTTGATGAGGAACTGCTTAGAGGGCAGTATTTTGAAGAGGAAATGGTGCAGATGCTTCAGATTGCACTGGCATGTGTGGCAAAAGTGGCAGATAATAGGCCAACAATGGATGAAACTGTTAGGAACATAGAGGAAATTAGGCTTCCTGATTTGAATAACCGTAACACATCATCTGAGTCTGAATCTAATGTACAAACTCCATGA 1935 0.4388 MKFQLHAVTFVLLSFIMSLFGLIVADLNSDRQALLEFFSNVPHAPRLNWSESTPICTSWAGVTCNKNETSVISIRLPGAGFKGSIPENSLGKLNSLKILSLHSNGLRGNLPSDILSIPSLQYVNLQQNYFSGLIPSSISPKLVALDISSNNFSGSIPPTLQNLSRLTWLYLQNNSLSGAIPDFNFPSLKYLNLSYNNLNGSIPNSINNYPYTSFAGNSHLCGPPLNKCSAASTPSSSSSLSPSPVYQPLSPAAAPQNRNATTSKSYFSLASILALAIGGCAFLSLLVLVMFVCCLKKNKSQSSGILTGKAPCSGKSEVSKSFGSGVQDIEKNRLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTTYRAALEDGTAVVVKRLREVLVGKKEFEQQMEVVGRIGRHPNVMPLRAFYFSKDEKLLVYDYMPGGSLFSLLHGNRGMGRAPLDWDSRMKIALGAAKGIASIHTDHMDSKLTHGNIKSSNVLITQEHDGCITDVGLTPVMTTQSTMSKTNGYRAPEVTEYRRITQKSDVYSFGVLLLEMLTGKAPMGYSGYEDMVDLPRWVRSVVREEWTAEVFDEELLRGQYFEEEMVQMLQIALACVAKVADNRPTMDETVRNIEEIRLPDLNNRNTSSESESNVQTP* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1937 644 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Pvu8g1937 644 MobiDBLite consensus disorder prediction 626 644 - -
Pvu8g1937 644 Gene3D Ribonuclease Inhibitor 28 141 IPR032675 -
Pvu8g1937 644 PANTHER OS05G0588300 PROTEIN 5 644 - -
Pvu8g1937 644 SUPERFAMILY L domain-like 40 225 - -
Pvu8g1937 644 Gene3D Phosphorylase Kinase; domain 1 317 426 - -
Pvu8g1937 644 Pfam Protein kinase domain 355 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1937 644 ProSitePatterns Protein kinases ATP-binding region signature. 357 388 IPR017441 GO:0005524
Pvu8g1937 644 MobiDBLite consensus disorder prediction 624 644 - -
Pvu8g1937 644 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Pvu8g1937 644 ProSiteProfiles Protein kinase domain profile. 351 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1937 644 Pfam Leucine Rich Repeat 187 207 IPR001611 GO:0005515
Pvu8g1937 644 Gene3D Ribonuclease Inhibitor 142 230 IPR032675 -
Pvu8g1937 644 Gene3D Transferase(Phosphotransferase) domain 1 427 642 - -
Pvu8g1937 644 PANTHER LRR RECEPTOR-LIKE KINASE 5 644 - -
Pvu8g1937 644 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Pvu8g1937 644 SUPERFAMILY Protein kinase-like (PK-like) 355 619 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1937 Pvu-Chr8 49029268 49033295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1937 15 642 Receptor kinase-like Gene Family AT5G58300 56.625 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu8g1937 Pkinase 8.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1937 - - gmx:100786974 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1937 8 49029268 49033295 Pvu9g0440 9 8334746 8339792 PCT