Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1935 ATGGTTTCCTCTCAGTTCTCTGTCTTGAATGGAAATAGTTCACCAAAGTCTTTCCTGAACCAGTTGGTTCTATCAAATGGACCACCCGATCTTTTGCCTTCTTCGAATTGTGAGGATTTTGAATTTTCTGATGTGTTTGGTTCATCTCCTGTTGAAGCCTCAATAACAGTAAGCTCCGAGAAATATGGAGATCACGTAGCTACACGAGGTTCAGGTGGAAAGATTTACAATGATTTTGACTGCAATAACATCCGCTCTCAATCTTTATTGGCTCCCACAACTTGTATTGATCGGTCCTTGCAGCTTAGCAAGCTCACCTTACATGAGACAGAAGATGCATTGGATCTTGTGGAGGTCTTAATAGACACACAGAAAGGACTTAAGAAACATTCTATTAACAATACAGCAGTAGAGAAAAATGATTTACATTTCGATGATTACTGTCTGAATAATCAGACTATTGGAGTTGAGGATTTTGAACTTTTGAAGGTTGTTGGGCAAGGTGCTTTTGGCAAGGTGTACCAGGTGAGGAGGGCAGGTACTTCTGAAATATATGCTATGAAGGTCATGCGTAAGGATAAGATCATGGAGAGAAACCATGCTGAATATGTAAAATCTGAAAGGGATATACTAACAAAGGTGGACAACCCATTTGTTGTGCGGCTCAGATACGCTTTCCAAACCAAATATAGGTTGTACCTTGTGCTTGATTTTGTCAATGGTGGCCATCTTTTCTTTCAGCTCTATCACCAAGGCCTATTCAGGGAAGATTTGGCACGCTTTTATGCCGCAGAGATTATCTGTGCTGTTTCTTATCTTCACGCAAATGATATAATGCACAGGGATCTTAAGCCTGAAAATATTCTTCTCGATGTAGATGGTCATGCTGTGTTAACAGATTTTGGCCTGGCTAAGCAATTCAATGAGACTGGAAGATCTAATTCTATGTGTGGAACTGTAGAATACATGGCCCCTGAAATTGTAATGGGAAAAGGTCATGATAAGGCTGCTGATTGGTGGAGTTTGGGAATTTTACTATATGAAATGCTTACAGGAAAGCCTCCTTTCTCCGGCGGAAATAGACATAAGATGCAGCAGAAGATAATTAAAGACAAAATCAAGCTCCCAGCATTTTTGTCAAATGAGGCACATTCACTGTTAAAAGGGCTGTTGCAGAAAGATGTCAGCAAACGCCTTGGCAGTGGATCAAGAAGCAGTGAGGAGATTAAAAGCCACAAGTGGTTTAAGTCTGTCAACTGGAAGAAACTGGAAGCCCGTGAAGTTAGGCCATGCTTTGTTCCAAATTTCTGGGAAGCACTGTGTTGCTAA 1329 0.4086 MVSSQFSVLNGNSSPKSFLNQLVLSNGPPDLLPSSNCEDFEFSDVFGSSPVEASITVSSEKYGDHVATRGSGGKIYNDFDCNNIRSQSLLAPTTCIDRSLQLSKLTLHETEDALDLVEVLIDTQKGLKKHSINNTAVEKNDLHFDDYCLNNQTIGVEDFELLKVVGQGAFGKVYQVRRAGTSEIYAMKVMRKDKIMERNHAEYVKSERDILTKVDNPFVVRLRYAFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARFYAAEIICAVSYLHANDIMHRDLKPENILLDVDGHAVLTDFGLAKQFNETGRSNSMCGTVEYMAPEIVMGKGHDKAADWWSLGILLYEMLTGKPPFSGGNRHKMQQKIIKDKIKLPAFLSNEAHSLLKGLLQKDVSKRLGSGSRSSEEIKSHKWFKSVNWKKLEAREVRPCFVPNFWEALCC* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1935 442 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 440 - -
Pvu8g1935 442 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 442 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pvu8g1935 442 SUPERFAMILY Protein kinase-like (PK-like) 146 437 IPR011009 -
Pvu8g1935 442 Pfam Protein kinase domain 159 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1935 442 ProSiteProfiles Protein kinase domain profile. 159 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1935 442 Gene3D Transferase(Phosphotransferase) domain 1 239 434 - -
Pvu8g1935 442 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 440 - -
Pvu8g1935 442 ProSitePatterns Protein kinases ATP-binding region signature. 165 188 IPR017441 GO:0005524
Pvu8g1935 442 CDD STKc_AGC 165 415 IPR045270 GO:0004674|GO:0005524
Pvu8g1935 442 SMART serkin_6 159 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1935 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Pvu8g1935 442 Gene3D Phosphorylase Kinase; domain 1 157 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1935 Pvu-Chr8 49019140 49023018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1935 1 434 AGC Kinase Gene Family AT3G08720 62.108 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pvu8g1935 Pkinase 8.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1935 K04688 - gmx:100803509 724.931