Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1929 ATGGAAGCATATCCAAACGCGGCCTCCATGCTGAGAAGCAGAACTACAATACCTCCTCCTCCACCGTTACTCGCTCTCAGTGCAAGGCTTCCGTCACCGTCACCGTCACCGTTACTGTCACCCTCCGTTACCCTCTCGAAACCCACACTATCGTGTTCAGGAACCCCGAAACCCTCGCTCCACCGTTTTTCTCTCTTCTCCCATTCTCACACTCTTCAAACCATGACGCTCTCCAAGTGCTTCTCTCACACTGGGCCCACCGTCCCCATTCCGGAGCCACCAGGATCCGAACCCCAACCCGATTCTCCTCTCGTGGTGGTTTCCTTCTACAAATTTGCGGATTTTCCCGATCATACTCTCATGCGAAACCCCTTGAAGCAACTCTGTCAACGCCTGCGTGTTTCAGGTGGAATTATTCTTGCGCCTGAAGGGATCAATGGCAGCATATGTGGGTCTCGGGAGTCAGTGGAGGACGTTCTGGCATTTGTGGAAGGCAATGATCGATTGAAGGGGCTAAGGCGAGTGGAATCACCTGTCAGTCCTGAGGAAGAGGCCATCCATCATGGGCATAGTGCTGCTTCTCCTCTTGCTGCTGGGGAAGATGCGCCCTTCCGATGGGATCATGTGAGGGTCAAGTTGAAGAAAGAGATTGTTACTCTTGGGATGCCTACTGTGTCGCCTATTGAAAGGGTTGGAAAGTATGTTGGCCCAGAAGAGTGGAATGCTTTGATCAATGATCCAGATACAGTGGTTATTGATGTGCGTAATAACTATGAAACCAGAATTGGAAAGTTTAAAGGAGCAGTTGATCCATGTACTACATCATTTCGTGAATTCCCGTCTTGGGTAGAGGAGCATTTCCAGCTTAGCGAAACAGATGATGGTGAGCATCCAAAAGTTGAGGTAAACAATTCAGTCCAACCTGCTGAAAAAGAAATGGAGAATCAAAAACAACATATGCCACGTGTTGCAATGTATTGCACTGGAGGTATTCGTTGTGAGAAAGCTACAAGTCTACTTCTCAGCAAAGGTTTCAAAGAGGTTTATCACCTGGAAGGTGGAATTCTAAAATATCTTGAAGAGGTTCCAGAGACAGAGAGCCTCTGGGAAGGGGAGTGCTTTGTTTTCGACAAACGCGTCTCTGTGGAGCATGGCCTGGTGCCAGGAAATTTCAAACTCTGCTACGGTTGTAAACAGCCCGTGAGTGATGCTGACATGGAGGCCCCAGAGTTTGAATATGGAGTTTCCTGTCCTCACTGTTTTGCACAGAAATCTGATGAAGAGAAGGAGAGAGCTCGTGCTCGACAAACACAATTTGAGAGATGGGGAATCATAGGTGGTCCAGACAAGGGTCGCCGCCCAACTACTCAAGAACCGGAAAGTGCTGGCAGGAATCCAAACCAGCTTTCACGTTCTATTTAA 1422 0.4866 MEAYPNAASMLRSRTTIPPPPPLLALSARLPSPSPSPLLSPSVTLSKPTLSCSGTPKPSLHRFSLFSHSHTLQTMTLSKCFSHTGPTVPIPEPPGSEPQPDSPLVVVSFYKFADFPDHTLMRNPLKQLCQRLRVSGGIILAPEGINGSICGSRESVEDVLAFVEGNDRLKGLRRVESPVSPEEEAIHHGHSAASPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVSPIERVGKYVGPEEWNALINDPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVEEHFQLSETDDGEHPKVEVNNSVQPAEKEMENQKQHMPRVAMYCTGGIRCEKATSLLLSKGFKEVYHLEGGILKYLEEVPETESLWEGECFVFDKRVSVEHGLVPGNFKLCYGCKQPVSDADMEAPEFEYGVSCPHCFAQKSDEEKERARARQTQFERWGIIGGPDKGRRPTTQEPESAGRNPNQLSRSI* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1929 473 Gene3D - 96 218 - -
Pvu8g1929 473 CDD RHOD_YceA 232 360 - -
Pvu8g1929 473 MobiDBLite consensus disorder prediction 428 473 - -
Pvu8g1929 473 ProSiteProfiles Rhodanese domain profile. 245 367 IPR001763 -
Pvu8g1929 473 Pfam Rhodanese-like domain 238 360 IPR001763 -
Pvu8g1929 473 SMART rhod_4 235 364 IPR001763 -
Pvu8g1929 473 Hamap tRNA uridine(34) hydroxylase [trhO]. 102 404 IPR020936 -
Pvu8g1929 473 Pfam UPF0176 acylphosphatase like domain 105 217 IPR040503 -
Pvu8g1929 473 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 101 453 - -
Pvu8g1929 473 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 214 393 IPR036873 -
Pvu8g1929 473 MobiDBLite consensus disorder prediction 458 473 - -
Pvu8g1929 473 MobiDBLite consensus disorder prediction 15 29 - -
Pvu8g1929 473 Gene3D - 219 400 IPR036873 -
Pvu8g1929 473 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 101 453 IPR020936 -
Pvu8g1929 473 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1929 Pvu-Chr8 48942117 48946631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1929 104 473 Sulfurtransferasese or Rhodanese AT2G40760 75.000 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1929 - - gmx:100784854 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1929 8 48942117 48946631 Pvu8g1929 8 48942117 48946631 ECH